RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1041773", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA1041773 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28551311 28551311 PRJNA1041773_P_NODE_92027_length_245_cov_0.895349_g91694_i0 PRJNA1041773 92027 245 0.895349 2.19360505 Synergistota bacterium 2268202 Bacteria Bacteria 167 2.4799999999999996e-47   NR MBC7332605.1 2268202 g91694 i0 100 0.991836734693878 81 0 99.2 0 3 245 27 107 MBC7332605.1 tetratricopeptide repeat protein [Synergistota bacterium] diamond 243 167 1 Bacteria   Thermotogati Synergistota         Synergistota bacterium
31330697 31330697 PRJNA1041773_P_NODE_96656_length_243_cov_0.905882_g96323_i0 PRJNA1041773 96656 243 0.905882 2.20129326 Acetomicrobium sp. S15 = DSM 1 1872099 Bacteria Bacteria 57 2.86e-7   NR WP_198470613.1 2529858 g96323 i0 62.5 1.48148148148148 40 15 49.4 0 154 35 249 288 WP_198470613.1 carbon-nitrogen hydrolase family protein [Acetomicrobium sp. S15 = DSM 107314] diamond 360 57 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Acetomicrobiaceae Acetomicrobium Acetomicrobium sp. S15 = DSM 107314

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;