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contig_metadata

3 rows where bioproject = "PRJNA1041773", tax_clade = "named eukaryotic clones" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_clade 1

  • named eukaryotic clones · 3 ✖

bioproject 1

  • PRJNA1041773 · 3 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
170984 170984 PRJNA1041773_P_NODE_87861_length_246_cov_4.023121_g87528_i0 PRJNA1041773 87861 246 4.023121 9.89687766 uncultured eukaryote HF0200_37F04 542502 Root_unresolved Root_unresolved 396 8.909999999999996e-106   NTclustered gi|193084614|gb|EU795185.1| 542502 g87528 i0 95.902 100.069105691057 244 10 99 0 3 246 3247 3004 Uncultured eukaryote HF0200_37F04 genomic sequence blastn 24617 396 1 Eukaryota named eukaryotic clones             uncultured eukaryote HF0200_37F04
3997600 3997600 PRJNA1041773_P_NODE_99604_length_242_cov_0.804734_g99271_i0 PRJNA1041773 99604 242 0.804734 1.94745628 uncultured eukaryote HF0200_37F04 542502 Root_unresolved Root_unresolved 346 8.930000000000001e-91   NTclustered gi|193084614|gb|EU795185.1| 542502 g99271 i0 95.023 101.392561983471 221 9 91 2 23 242 3925 3706 Uncultured eukaryote HF0200_37F04 genomic sequence blastn 24537 346 1 Eukaryota named eukaryotic clones             uncultured eukaryote HF0200_37F04
5272670 5272670 PRJNA1041773_P_NODE_103185_length_235_cov_4.740741_g102852_i0 PRJNA1041773 103185 235 4.740741 11.14074135 uncultured eukaryote HF0200_37F04 542502 Root_unresolved Root_unresolved 106 1.59e-18   NTclustered gi|193084614|gb|EU795185.1| 542502 g102852 i0 95.522 1.62127659574468 67 1 28 2 1 66 4648 4583 Uncultured eukaryote HF0200_37F04 genomic sequence blastn 381 106 1 Eukaryota named eukaryotic clones             uncultured eukaryote HF0200_37F04

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;