RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1041773", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1041773 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31741819 31741819 PRJNA1041773_P_NODE_77357_length_251_cov_0.865169_g77024_i0 PRJNA1041773 77357 251 0.865169 2.17157419 Chlamydia sp. 32-24 1895742 Bacteria Bacteria 135 5.39e-36   NR OJU80014.1 1895742 g77024 i0 98.5 0.812749003984064 68 1 81.3 0 205 2 1 68 OJU80014.1 MAG: hypothetical protein BGO10_00750 [Chlamydia sp. 32-24] diamond 204 135 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia sp. 32-24
32627402 32627402 PRJNA1041773_P_NODE_27080_length_400_cov_2.318043_g26749_i0 PRJNA1041773 27080 400 2.318043 9.272172 Simkaniaceae bacterium 2698248 Bacteria Bacteria 152 1.68e-44   NR NRA90816.1 2698248 g26749 i0 81.6 66.9075 98 15 71.3 1 93 377 40 137 NRA90816.1 NFYB/HAP3 family transcription factor subunit [Simkaniaceae bacterium] diamond 26763 152 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae   Simkaniaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;