contig_metadata
12 rows where bioproject = "PRJNA1041773", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2721288 | 2721288 | PRJNA1041773_P_NODE_77583_length_251_cov_0.865169_g77250_i0 | PRJNA1041773 | 77583 | 251 | 0.865169 | 2.17157419 | Strongyloides papillosus | 174720 | Nematoda | Nematoda | 54.7 | 0.006 | NTclustered | gi|687022649|emb|LM525563.1| | 174720 | g77250 | i0 | 100 | 0.115537848605578 | 29 | 0 | 12 | 0 | 76 | 104 | 561381 | 561353 | Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_scaffold0000008 | blastn | 29 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides papillosus | |
| 7823563 | 7823563 | PRJNA1041773_P_NODE_82327_length_249_cov_0.875000_g81994_i0 | PRJNA1041773 | 82327 | 249 | 0.875 | 2.17875 | Caenorhabditis remanei | 31234 | Nematoda | Nematoda | 294 | 3.39e-75 | NTclustered | gi|2445366874|ref|XM_003111644.2| | 31234 | g81994 | i0 | 88.477 | 97.2449799196787 | 243 | 28 | 98 | 0 | 7 | 249 | 23 | 265 | Caenorhabditis remanei uncharacterized protein (GCK72_010699), partial mRNA | blastn | 24214 | 294 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis remanei | |
| 12924018 | 12924018 | PRJNA1041773_P_NODE_44771_length_318_cov_1.281633_g44438_i0 | PRJNA1041773 | 44771 | 318 | 1.281633 | 4.07559294 | Caenorhabditis briggsae | 6238 | Nematoda | Nematoda | 289 | 2.09e-73 | NTclustered | gi|11095039|gb|AC084589.1|CBRG41K24 | 6238 | g44438 | i0 | 87.854 | 89.4905660377358 | 247 | 29 | 78 | 1 | 44 | 290 | 5795 | 6040 | Caenorhabditis briggsae cosmid G41K24, complete sequence | blastn | 28458 | 289 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis briggsae | |
| 27161362 | 27161362 | PRJNA1041773_P_NODE_98682_length_242_cov_0.911243_g98349_i0 | PRJNA1041773 | 98682 | 242 | 0.911243 | 2.20520806 | Gnathostoma spinigerum | 75299 | Nematoda | Nematoda | 41.2 | 0.0477 | NR | MFH4984072.1 | 75299 | g98349 | i0 | 41.3 | 0.570247933884298 | 46 | 27 | 57 | 0 | 138 | 1 | 25 | 70 | MFH4984072.1 hypothetical protein [Gnathostoma spinigerum] | diamond | 138 | 41.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Gnathostomatidae | Gnathostoma | Gnathostoma spinigerum | |
| 27762044 | 27762044 | PRJNA1041773_P_NODE_75964_length_253_cov_1.022222_g75631_i0 | PRJNA1041773 | 75964 | 253 | 1.022222 | 2.58622166 | Caenorhabditis briggsae | 6238 | Nematoda | Nematoda | 76.6 | 4.84e-14 | NR | XP_002645577.2 | 6238 | g75631 | i0 | 52.6 | 3.37944664031621 | 57 | 26 | 67.6 | 1 | 173 | 3 | 213 | 268 | XP_002645577.2 Protein CBG05275 [Caenorhabditis briggsae] | diamond | 855 | 76.6 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis briggsae | |
| 28645980 | 28645980 | PRJNA1041773_P_NODE_101487_length_241_cov_0.916667_g101154_i0 | PRJNA1041773 | 101487 | 241 | 0.916667 | 2.20916747 | Halicephalobus sp. NKZ332 | 2598192 | Nematoda | Nematoda | 84.3 | 8.44e-17 | NR | KAE9550296.1 | 2598192 | g101154 | i0 | 97.6 | 0.510373443983402 | 41 | 1 | 51 | 0 | 80 | 202 | 19 | 59 | KAE9550296.1 hypothetical protein FO519_006486 [Halicephalobus sp. NKZ332] | diamond | 123 | 84.3 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Panagrolaimidae | Halicephalobus | Halicephalobus sp. NKZ332 | |
| 30983239 | 30983239 | PRJNA1041773_P_NODE_100114_length_241_cov_1.404762_g99781_i0 | PRJNA1041773 | 100114 | 241 | 1.404762 | 3.38547642 | Trichuris suis | 68888 | Nematoda | Nematoda | 55.8 | 8.74e-7 | NR | KFD48333.1 | 68888 | g99781 | i0 | 54.2 | 0.597510373443983 | 48 | 22 | 59.8 | 0 | 240 | 97 | 520 | 567 | KFD48333.1 hypothetical protein M513_10825 [Trichuris suis] | diamond | 144 | 55.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Enoplea | Trichinellida | Trichuridae | Trichuris | Trichuris suis | |
| 31481208 | 31481208 | PRJNA1041773_P_NODE_59296_length_281_cov_1.480769_g58963_i0 | PRJNA1041773 | 59296 | 281 | 1.480769 | 4.16096089 | Metazoa | 33208 | Nematoda | Nematoda | 46.2 | 0.00354 | NR | KAI1715960.1 | 166010 | g58963 | i0 | 60.6 | 4.02491103202847 | 33 | 13 | 35.2 | 0 | 104 | 202 | 194 | 226 | KAI1715960.1 FAD dependent oxidoreductase domain-containing protein [Ditylenchus destructor] | diamond | 1131 | 46.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Anguinidae | Ditylenchus | Ditylenchus destructor | |
| 31489152 | 31489152 | PRJNA1041773_P_NODE_63276_length_274_cov_0.825871_g62943_i0 | PRJNA1041773 | 63276 | 274 | 0.825871 | 2.26288654 | Trichinella nativa | 6335 | Nematoda | Nematoda | 45.8 | 2.3e-4 | NR | KRZ47273.1 | 6335 | g62943 | i0 | 100 | 0.240875912408759 | 22 | 0 | 24.1 | 0 | 260 | 195 | 12 | 33 | KRZ47273.1 hypothetical protein T02_1459 [Trichinella nativa] | diamond | 66 | 45.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Enoplea | Trichinellida | Trichinellidae | Trichinella | Trichinella nativa | |
| 31646898 | 31646898 | PRJNA1041773_P_NODE_95277_length_243_cov_1.482353_g94944_i0 | PRJNA1041773 | 95277 | 243 | 1.482353 | 3.60211779 | Caenorhabditis brenneri | 135651 | Nematoda | Nematoda | 169 | 8.98e-47 | NR | EGT51887.1 | 135651 | g94944 | i0 | 98.8 | 0.987654320987654 | 80 | 1 | 98.8 | 0 | 2 | 241 | 1521 | 1600 | EGT51887.1 CBN-DAF-2 protein [Caenorhabditis brenneri] | diamond | 240 | 169 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis brenneri | |
| 31773494 | 31773494 | PRJNA1041773_P_NODE_44077_length_320_cov_1.979757_g43744_i0 | PRJNA1041773 | 44077 | 320 | 1.979757 | 6.3352224 | Ostertagia ostertagi | 6317 | Nematoda | Nematoda | 136 | 1.7599999999999998e-37 | NR | KAK6031660.1 | 6317 | g43744 | i0 | 58.5 | 0.99375 | 106 | 44 | 99.4 | 0 | 2 | 319 | 23 | 128 | KAK6031660.1 DNA (cytosine-5-)-methyltransferase [Ostertagia ostertagi] | diamond | 318 | 136 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Trichostrongylidae | Ostertagia | Ostertagia ostertagi | |
| 32469884 | 32469884 | PRJNA1041773_P_NODE_94359_length_244_cov_0.900585_g94026_i0 | PRJNA1041773 | 94359 | 244 | 0.900585 | 2.1974274 | Halicephalobus sp. NKZ332 | 2598192 | Nematoda | Nematoda | 50.8 | 3.55e-5 | NR | KAE9549335.1 | 2598192 | g94026 | i0 | 69 | 0.35655737704918 | 29 | 9 | 35.7 | 0 | 243 | 157 | 189 | 217 | KAE9549335.1 hypothetical protein FO519_007451 [Halicephalobus sp. NKZ332] | diamond | 87 | 50.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Panagrolaimidae | Halicephalobus | Halicephalobus sp. NKZ332 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;