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contig_metadata

28 rows where bioproject = "PRJNA1041773" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 28 ✖

bioproject 1

  • PRJNA1041773 · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
170032 170032 PRJNA1041773_P_NODE_2541_length_1288_cov_28.766255_g2351_i0 PRJNA1041773 2541 1288 28.766255 370.5093644 Eutreptiella gymnastica 73025 Euglenozoa other_Eukaryota 2279 0   NTclustered gi|320445250|gb|HQ828067.1| 73025 g2351 i0 99.919 36.2391304347826 1238 0 96 1 1 1238 1237 1 Eutreptiella gymnastica strain qd0901-1 18S ribosomal RNA gene, partial sequence blastn 46676 2279 1 Eukaryota Discoba   Euglenozoa Euglenida Eutreptiales Eutreptiaceae Eutreptiella Eutreptiella gymnastica
170081 170081 PRJNA1041773_P_NODE_28701_length_389_cov_15.316456_g28370_i0 PRJNA1041773 28701 389 15.316456 59.58101384 Lacrimia vacuolata 3051248 Euglenozoa other_Eukaryota 560 4.99e-155   NTclustered gi|2514496195|gb|OR094903.1| 3051248 g28370 i0 92.602 101.596401028278 392 25 100 4 1 389 1889 1499 Lacrimia vacuolata isolate YPF1808 small subunit ribosomal RNA gene, partial sequence blastn 39521 560 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Lacrimia Lacrimia vacuolata
170101 170101 PRJNA1041773_P_NODE_29841_length_382_cov_9.812298_g29509_i0 PRJNA1041773 29841 382 9.812298 37.48297836 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 544 4.93e-150   NTclustered gi|560190589|gb|KF633467.1| 91374 g29509 i0 92.448 3.7434554973822 384 23 100 5 1 382 3466 3087 Diplonema papillatum strain ATCC 50162 28S ribosomal RNA gene, complete sequence blastn 1430 544 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
170183 170183 PRJNA1041773_P_NODE_35221_length_354_cov_1.654804_g34888_i0 PRJNA1041773 35221 354 1.654804 5.85800616 uncultured kinetoplastid 204529 Euglenozoa other_Eukaryota 508 1.65e-139   NTclustered gi|363903324|gb|JN542574.1| 204529 g34888 i0 92.938 79.2429378531073 354 18 99 7 1 351 1338 989 Uncultured kinetoplastid clone Kryos_IF_C10 18S ribosomal RNA gene, partial sequence blastn 28052 508 1 Eukaryota Discoba   Euglenozoa Kinetoplastea       uncultured kinetoplastid
2283707 2283707 PRJNA1041773_P_NODE_47642_length_309_cov_1.635593_g47309_i0 PRJNA1041773 47642 309 1.635593 5.05398237 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 315 3.3299999999999993e-81   NTclustered gi|662247341|gb|KJ742907.1| 5698 g47309 i0 88.76 127.333333333333 258 28 83 1 53 309 6593 6336 Trypanosoma rangeli isolate SC58 intergenic spacer, 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S alpha ribosomal RNA gene, internal transcribed spacer 3, 28S gamma ribosomal RNA gene, internal transcribed spacer 4, 28S beta ribosomal RNA gene, internal transcribed spacer 5, 28S delta ribosomal RNA gene, internal transcribed spacer 6, and 28S zeta ribosomal RNA gene, complete sequence blastn 39346 316 0.996835443037975 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
2720384 2720384 PRJNA1041773_P_NODE_17903_length_490_cov_19.894484_g17573_i0 PRJNA1041773 17903 490 19.894484 97.4829716 Eutreptiella pomquetensis 215699 Euglenozoa other_Eukaryota 350 1.51e-91   NTclustered gi|194368882|gb|EU624012.1| 215699 g17573 i0 91.12 53.8571428571429 259 21 94 2 2 260 2897 3153 Eutreptiella pomquetensis strain CCMP 1491 large subunit ribosomal RNA gene, partial sequence blastn 26390 350 1 Eukaryota Discoba   Euglenozoa Euglenida Eutreptiales Eutreptiaceae Eutreptiella Eutreptiella pomquetensis
3997467 3997467 PRJNA1041773_P_NODE_89864_length_246_cov_0.890173_g89531_i0 PRJNA1041773 89864 246 0.890173 2.18982558 Eutreptiella gymnastica 73025 Euglenozoa other_Eukaryota 311 3.32e-80   NTclustered gi|429330004|ref|NC_017754.2| 73025 g89531 i0 90 103.857723577236 240 24 98 0 1 240 29745 29984 Eutreptiella gymnastica plastid, complete genome blastn 25549 311 1 Eukaryota Discoba   Euglenozoa Euglenida Eutreptiales Eutreptiaceae Eutreptiella Eutreptiella gymnastica
5272932 5272932 PRJNA1041773_P_NODE_28705_length_389_cov_8.433544_g28374_i0 PRJNA1041773 28705 389 8.433544 32.80648616 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 501 3.0699999999999993e-137   NTclustered gi|560190589|gb|KF633467.1| 91374 g28374 i0 89.899 2.03341902313625 396 31 100 5 1 389 1601 1994 Diplonema papillatum strain ATCC 50162 28S ribosomal RNA gene, complete sequence blastn 791 501 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
5272943 5272943 PRJNA1041773_P_NODE_29385_length_385_cov_3.375000_g29053_i0 PRJNA1041773 29385 385 3.375 12.99375 uncultured marine diplonemid 547051 Euglenozoa other_Eukaryota 263 1.56e-65   NTclustered gi|223047901|gb|FJ032685.1| 547051 g29053 i0 79.79 61.6441558441558 381 62 97 14 4 376 1142 769 Uncultured marine diplonemid clone Ma131_1A46 28S ribosomal RNA gene, partial sequence blastn 23733 263 1 Eukaryota Discoba   Euglenozoa Diplonemea       uncultured marine diplonemid
5273854 5273854 PRJNA1041773_P_NODE_92525_length_244_cov_4.526316_g92192_i0 PRJNA1041773 92525 244 4.526316 11.04421104 Eutreptiella pomquetensis 215699 Euglenozoa other_Eukaryota 237 5.6600000000000005e-58   NTclustered gi|194368882|gb|EU624012.1| 215699 g92192 i0 90.659 6.27049180327869 182 12 73 4 1 177 1587 1768 Eutreptiella pomquetensis strain CCMP 1491 large subunit ribosomal RNA gene, partial sequence blastn 1530 237 1 Eukaryota Discoba   Euglenozoa Euglenida Eutreptiales Eutreptiaceae Eutreptiella Eutreptiella pomquetensis
6548496 6548496 PRJNA1041773_P_NODE_53926_length_292_cov_1.872146_g53593_i0 PRJNA1041773 53926 292 1.872146 5.46666632 Eutreptiella gymnastica 73025 Euglenozoa other_Eukaryota 472 1.75e-128   NTclustered gi|429330004|ref|NC_017754.2| 73025 g53593 i0 97.473 103.705479452055 277 5 95 1 1 277 11036 10762 Eutreptiella gymnastica plastid, complete genome blastn 30282 472 1 Eukaryota Discoba   Euglenozoa Euglenida Eutreptiales Eutreptiaceae Eutreptiella Eutreptiella gymnastica
6548544 6548544 PRJNA1041773_P_NODE_56706_length_286_cov_1.995305_g56373_i0 PRJNA1041773 56706 286 1.995305 5.7065723 Eutreptiella pomquetensis 215699 Euglenozoa other_Eukaryota 237 6.8e-58   NTclustered gi|194368882|gb|EU624012.1| 215699 g56373 i0 87.745 61.7517482517483 204 23 71 2 85 286 1341 1544 Eutreptiella pomquetensis strain CCMP 1491 large subunit ribosomal RNA gene, partial sequence blastn 17661 237 1 Eukaryota Discoba   Euglenozoa Euglenida Eutreptiales Eutreptiaceae Eutreptiella Eutreptiella pomquetensis
6548748 6548748 PRJNA1041773_P_NODE_70326_length_261_cov_4.553191_g69993_i0 PRJNA1041773 70326 261 4.553191 11.88382851 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 364 2.689999999999999e-96   NTclustered gi|560190589|gb|KF633467.1| 91374 g69993 i0 91.954 3.1455938697318 261 20 100 1 1 261 1559 1300 Diplonema papillatum strain ATCC 50162 28S ribosomal RNA gene, complete sequence blastn 821 364 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
10373515 10373515 PRJNA1041773_P_NODE_43149_length_323_cov_3.072000_g42816_i0 PRJNA1041773 43149 323 3.072 9.92256 uncultured marine diplonemid 547051 Euglenozoa other_Eukaryota 198 3.68e-46   NTclustered gi|223047901|gb|FJ032685.1| 547051 g42816 i0 85.714 1.22600619195046 189 25 59 1 135 323 2407 2221 Uncultured marine diplonemid clone Ma131_1A46 28S ribosomal RNA gene, partial sequence blastn 396 198 1 Eukaryota Discoba   Euglenozoa Diplonemea       uncultured marine diplonemid
12924327 12924327 PRJNA1041773_P_NODE_66331_length_268_cov_1.912821_g65998_i0 PRJNA1041773 66331 268 1.912821 5.12636028 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 54.7 0.007   NTclustered gi|2119417935|ref|XM_044688399.1| 51637 g65998 i0 96.97 0.123134328358209 33 0 12 1 46 77 2955 2923 Naegleria lovaniensis uncharacterized protein (C9374_012613), partial mRNA blastn 33 54.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
12924589 12924589 PRJNA1041773_P_NODE_81951_length_249_cov_0.875000_g81618_i0 PRJNA1041773 81951 249 0.875 2.17875 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 93.5 1.33e-14   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g81618 i0 98.113 0.21285140562249 53 1 21 0 1 53 3929 3981 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 53 93.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
12924617 12924617 PRJNA1041773_P_NODE_83631_length_248_cov_1.902857_g83298_i0 PRJNA1041773 83631 248 1.902857 4.71908536 Eutreptiella gymnastica 73025 Euglenozoa other_Eukaryota 351 1.97e-92   NTclustered gi|429330004|ref|NC_017754.2| 73025 g83298 i0 97.561 92.6048387096774 205 5 83 0 3 207 10299 10095 Eutreptiella gymnastica plastid, complete genome blastn 22966 351 1 Eukaryota Discoba   Euglenozoa Euglenida Eutreptiales Eutreptiaceae Eutreptiella Eutreptiella gymnastica
15035874 15035874 PRJNA1041773_P_NODE_11192_length_616_cov_6.488029_g10867_i0 PRJNA1041773 11192 616 6.488029 39.96625864 Lacrimia 2603953 Euglenozoa other_Eukaryota 1133 0   NTclustered gi|1214280015|gb|MF422200.1| 2015511 g10867 i0 99.838 88.2775974025974 616 1 100 0 1 616 433 1048 Diplonemida sp. isolate YPF1611 small subunit ribosomal RNA gene, partial sequence blastn 54379 1133 1 Eukaryota Discoba   Euglenozoa Diplonemea       Diplonemida sp.
15035961 15035961 PRJNA1041773_P_NODE_21132_length_451_cov_2.441799_g20802_i0 PRJNA1041773 21132 451 2.441799 11.01251349 Leishmania 5658 Euglenozoa other_Eukaryota 246 1.87e-60   NTclustered gi|440222381|gb|JX030049.1| 5659 g20802 i0 94.904 88.5942350332594 157 8 62 0 1 157 495 339 Leishmania amazonensis isolate LaPH8.rRNA.25 28S ribosomal RNA (LSU-beta), partial sequence blastn 39956 246 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
15473361 15473361 PRJNA1041773_P_NODE_59753_length_280_cov_1.734300_g59420_i0 PRJNA1041773 59753 280 1.7343 4.85604 Eutreptiella pomquetensis 215699 Euglenozoa other_Eukaryota 276 1.41e-69   NTclustered gi|194368882|gb|EU624012.1| 215699 g59420 i0 89.815 0.771428571428571 216 21 77 1 3 218 2562 2776 Eutreptiella pomquetensis strain CCMP 1491 large subunit ribosomal RNA gene, partial sequence blastn 216 276 1 Eukaryota Discoba   Euglenozoa Euglenida Eutreptiales Eutreptiaceae Eutreptiella Eutreptiella pomquetensis
17586117 17586117 PRJNA1041773_P_NODE_23494_length_428_cov_9.487324_g23163_i0 PRJNA1041773 23494 428 9.487324 40.60574672 Lacrimia 2603953 Euglenozoa other_Eukaryota 750 0   NTclustered gi|1214280015|gb|MF422200.1| 2015511 g23163 i0 99.515 98.8808411214953 412 2 96 0 1 412 412 1 Diplonemida sp. isolate YPF1611 small subunit ribosomal RNA gene, partial sequence blastn 42321 750 1 Eukaryota Discoba   Euglenozoa Diplonemea       Diplonemida sp.
19296943 19296943 PRJNA1041773_P_NODE_99096_length_242_cov_0.911243_g98763_i0 PRJNA1041773 99096 242 0.911243 2.20520806 Eutreptiella pomquetensis 215699 Euglenozoa other_Eukaryota 272 1.5399999999999998e-68   NTclustered gi|194368882|gb|EU624012.1| 215699 g98763 i0 88.739 7.10330578512397 222 25 92 0 17 238 2201 1980 Eutreptiella pomquetensis strain CCMP 1491 large subunit ribosomal RNA gene, partial sequence blastn 1719 272 1 Eukaryota Discoba   Euglenozoa Euglenida Eutreptiales Eutreptiaceae Eutreptiella Eutreptiella pomquetensis
20571159 20571159 PRJNA1041773_P_NODE_21497_length_447_cov_14.237968_g21167_i0 PRJNA1041773 21497 447 14.237968 63.64371696 Eutreptiella gymnastica 73025 Euglenozoa other_Eukaryota 815 0   NTclustered gi|5825253|gb|AF081590.1|AF081590 73025 g21167 i0 99.554 97.6174496644295 448 1 100 1 1 447 1539 1986 Eutreptiella gymnastica 18S ribosomal RNA gene, complete sequence; mitochondrial gene for mitochondrial product blastn 43635 815 1 Eukaryota Discoba   Euglenozoa Euglenida Eutreptiales Eutreptiaceae Eutreptiella Eutreptiella gymnastica
20571227 20571227 PRJNA1041773_P_NODE_27177_length_399_cov_4.325153_g26846_i0 PRJNA1041773 27177 399 4.325153 17.25736047 Sphenomonas quadrangularis 2704530 Euglenozoa other_Eukaryota 97.1 1.74e-15   NTclustered gi|1803019101|gb|MT007873.1| 2704530 g26846 i0 90.541 1.06265664160401 74 6 19 1 1 74 415 343 Sphenomonas quadrangularis isolate AM6 small subunit ribosomal RNA gene, partial sequence blastn 424 97.1 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Sphenomonadidae Sphenomonas Sphenomonas quadrangularis
24396183 24396183 PRJNA1041773_P_NODE_30840_length_376_cov_26.864686_g30508_i0 PRJNA1041773 30840 376 26.864686 101.01121936 Eutreptiella pomquetensis 215699 Euglenozoa other_Eukaryota 444 5.06e-120   NTclustered gi|194368882|gb|EU624012.1| 215699 g30508 i0 88.235 2.15691489361702 374 40 98 2 6 375 64 437 Eutreptiella pomquetensis strain CCMP 1491 large subunit ribosomal RNA gene, partial sequence blastn 811 444 1 Eukaryota Discoba   Euglenozoa Euglenida Eutreptiales Eutreptiaceae Eutreptiella Eutreptiella pomquetensis
25234970 25234970 PRJNA1041773_P_NODE_92540_length_244_cov_4.087719_g92207_i0 PRJNA1041773 92540 244 4.087719 9.97403436 Eutreptiella 73024 Euglenozoa other_Eukaryota 438 1.45e-118   NTclustered gi|723605874|gb|KJ158189.1| 73025 g92207 i0 99.18 99.4426229508197 244 0 100 1 1 244 561 802 Eutreptiella gymnastica strain NIES381 large subunit ribosomal RNA gene, partial sequence blastn 24264 438 1 Eukaryota Discoba   Euglenozoa Euglenida Eutreptiales Eutreptiaceae Eutreptiella Eutreptiella gymnastica
29530008 29530008 PRJNA1041773_P_NODE_80370_length_250_cov_0.870056_g80037_i0 PRJNA1041773 80370 250 0.870056 2.17514 Euglena gracilis 3039 Euglenozoa other_Eukaryota 142 1.66e-37   NR ABW06955.1 3039 g80037 i0 71.1 2.16 90 19 99.6 1 250 2 330 419 ABW06955.1 chloroplast light-harvesting complex II protein precursor, partial [Euglena gracilis] diamond 540 142 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
32311760 32311760 PRJNA1041773_P_NODE_95799_length_243_cov_0.905882_g95466_i0 PRJNA1041773 95799 243 0.905882 2.20129326 Bodo saltans 75058 Euglenozoa other_Eukaryota 73.2 4.2e-13   NR CUG91069.1 75058 g95466 i0 47.6 1.01234567901235 82 31 98.8 3 2 241 122 193 CUG91069.1 cyclin, putative [Bodo saltans] diamond 246 73.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;