RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1041773", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1041773 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28077418 28077418 PRJNA1041773_P_NODE_71785_length_259_cov_1.655914_g71452_i0 PRJNA1041773 71785 259 1.655914 4.28881726 Minisyncoccota bacterium 2053589 Bacteria Bacteria 50.4 3.01e-6   NR MFA5831361.1 2053589 g71452 i0 62.1 0.335907335907336 29 11 33.6 0 172 258 1 29 MFA5831361.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 87 50.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29498321 29498321 PRJNA1041773_P_NODE_99570_length_242_cov_0.863905_g99237_i0 PRJNA1041773 99570 242 0.863905 2.0906501 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.1 0.0279   NR MDD3007059.1 2053589 g99237 i0 37.7 0.756198347107438 61 36 74.4 2 20 199 224 283 MDD3007059.1 right-handed parallel beta-helix repeat-containing protein [Candidatus Paceibacterota bacterium] diamond 183 43.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32374879 32374879 PRJNA1041773_P_NODE_90139_length_245_cov_3.872093_g89806_i0 PRJNA1041773 90139 245 3.872093 9.48662785 Minisyncoccota bacterium 2053589 Bacteria Bacteria 56.6 6.61e-8   NR MFA7581867.1 2053589 g89806 i0 52.6 0.46530612244898 38 15 42.9 1 105 1 3 40 MFA7581867.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 114 56.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;