RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1041773", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA1041773 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6548680 6548680 PRJNA1041773_P_NODE_66406_length_268_cov_1.579487_g66073_i0 PRJNA1041773 66406 268 1.579487 4.23302516 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 303 6.14e-78   NTclustered gi|2306681518|gb|CP075337.1| 2980174 g66073 i0 87.218 5.91791044776119 266 34 99 0 1 266 372216 371951 Candidatus Saccharibacteria bacterium TM7i chromosome, complete genome blastn 1586 303 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i
27856427 27856427 PRJNA1041773_P_NODE_53045_length_294_cov_2.375566_g52712_i0 PRJNA1041773 53045 294 2.375566 6.98416404 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 45.8 0.00509   NR MBQ1563866.1 2026720 g52712 i0 51.4 0.714285714285714 35 17 35.7 0 287 183 89 123 MBQ1563866.1 sel1 repeat family protein [Candidatus Saccharibacteria bacterium] diamond 210 45.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30035306 30035306 PRJNA1041773_P_NODE_92651_length_244_cov_2.514620_g92318_i0 PRJNA1041773 92651 244 2.51462 6.1356728 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 82 3.54e-16   NR HSX32543.1 2973664 g92318 i0 57.5 1.9672131147541 80 33 97.1 1 8 244 89 168 HSX32543.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 480 82 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
31078033 31078033 PRJNA1041773_P_NODE_79635_length_250_cov_0.870056_g79302_i0 PRJNA1041773 79635 250 0.870056 2.17514 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 132 2.55e-36   NR MBB1566787.1 2026720 g79302 i0 75.6 0.984 82 20 98.4 0 1 246 126 207 MBB1566787.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 246 132 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;