metadata: contig_metadata: 24 rows where bioproject = "PRJNA1040136" and tax

24 rows where bioproject = "PRJNA1040136" and tax_superkingdom = "Bacteria"

descending

Link	rowid ▼	query	bioproject	node	length	coverage	rel_abundance	taxname_lca	taxid_lca	taxoncategory	taxoncategorysimple	bits	evalue	analysis_used	target	taxid	gene	allele	pident	sumperc_cov	alnlen	mismatch	qcov	gapopen	qstart	qend	tstart	tend	target_title	analysis	sumalnlen	maxbits	bits_percmax	tax_superkingdom	tax_clade	tax_kingdom	tax_phylum	tax_class	tax_order	tax_family	tax_genus	tax_species
1444408	1444408	PRJNA1040136_S_NODE_2762_length_241_cov_0.916667_g2759_i0	PRJNA1040136	2762	241	0.916667	2.20916747	root	1	Root_unresolved	Root_unresolved	115	1.29e-30	NR	WP_205637565.1	470	g2759	i0	89.1	12.7095435684647	64	7	79.7	0	1	192	89	152	WP_205637565.1 histone H2B family protein, partial [Acinetobacter baumannii]	diamond	3063	115	1	Bacteria		Pseudomonadati	Pseudomonadota	Gammaproteobacteria	Moraxellales	Moraxellaceae	Acinetobacter	Acinetobacter baumannii
7822346	7822346	PRJNA1040136_S_NODE_147_length_559_cov_2.481481_g144_i0	PRJNA1040136	147	559	2.481481	13.87147879	Planctomycetota bacterium	2026780	Bacteria	Bacteria	54.7	0.015	NTclustered	gi\|2621706020\|emb\|OY764082.1\|	2026780	g144	i0	96.875	0.21824686940966	32	1	6	0	25	56	522043	522074	MAG: Planctomycetota bacterium isolate b62d8c61-b663-4402-817f-8d709632624f genome assembly, chromosome: 1	blastn	122	54.7	1	Bacteria	PVC group	Pseudomonadati	Planctomycetota					Planctomycetota bacterium
10372971	10372971	PRJNA1040136_S_NODE_129_length_577_cov_3.019841_g126_i0	PRJNA1040136	129	577	3.019841	17.42448257	Natroniella sp. ANB-PHB2	3384444	Bacteria	Bacteria	54.7	0.016	NTclustered	gi\|2869714905\|gb\|CP175562.1\|	3384444	g126	i0	100	0.0502599653379549	29	0	5	0	355	383	1966746	1966718	Natroniella sp. ANB-PHB2 chromosome, complete genome	blastn	29	54.7	1	Bacteria		Bacillati	Bacillota	Clostridia	Halanaerobiales	Halobacteroidaceae	Natroniella	Natroniella sp. ANB-PHB2
14198346	14198346	PRJNA1040136_S_NODE_592_length_382_cov_4.200647_g589_i0	PRJNA1040136	592	382	4.200647	16.04647154	Flavobacterium dauae	1563479	Bacteria	Bacteria	56.5	0.003	NTclustered	gi\|2557430891\|gb\|CP130821.1\|	1563479	g589	i0	100	0.0785340314136126	30	0	8	0	265	294	1161409	1161438	Flavobacterium dauae strain TCH3-2 chromosome, complete genome	blastn	30	56.5	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Flavobacteriia	Flavobacteriales	Flavobacteriaceae	Flavobacterium	Flavobacterium dauae
15472563	15472563	PRJNA1040136_S_NODE_1653_length_277_cov_1.073529_g1650_i0	PRJNA1040136	1653	277	1.073529	2.97367533	Flavobacterium ammonificans	1751056	Bacteria	Bacteria	484	2.1199999999999996e-132	NTclustered	gi\|2119752067\|dbj\|AP025185.1\|	1751056	g1650	i0	98.195	1.9927797833935	277	5	100	0	1	277	1055518	1055794	Flavobacterium ammonificans SHINM13 DNA, complete genome	blastn	552	484	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Flavobacteriia	Flavobacteriales	Flavobacteriaceae	Flavobacterium	Flavobacterium ammonificans
18021607	18021607	PRJNA1040136_S_NODE_415_length_425_cov_8.258523_g412_i0	PRJNA1040136	415	425	8.258523	35.09872275	Priestia megaterium	1404	Bacteria	Bacteria	52.8	0.041	NTclustered	gi\|1935015176\|gb\|CP064793.1\|	1404	g412	i0	100	0.0658823529411765	28	0	7	0	331	358	3980692	3980665	Priestia megaterium strain IGA-FME-1 chromosome, complete genome	blastn	28	52.8	1	Bacteria		Bacillati	Bacillota	Bacilli	Bacillales	Bacillaceae	Priestia	Priestia megaterium
20570913	20570913	PRJNA1040136_S_NODE_1517_length_284_cov_1.957346_g1514_i0	PRJNA1040136	1517	284	1.957346	5.55886264	Vibrio gallaecicus	552386	Bacteria	Bacteria	52.8	0.026	NTclustered	gi\|2271101991\|dbj\|AP025490.1\|	552386	g1514	i0	100	0.0985915492957746	28	0	10	0	1	28	1609580	1609553	Vibrio gallaecicus CECT 7244 DNA, chromosome 1, complete sequence	blastn	28	52.8	1	Bacteria		Pseudomonadati	Pseudomonadota	Gammaproteobacteria	Vibrionales	Vibrionaceae	Vibrio	Vibrio gallaecicus
24395797	24395797	PRJNA1040136_S_NODE_1820_length_269_cov_4.336735_g1817_i0	PRJNA1040136	1820	269	4.336735	11.66581715	Latilactobacillus sakei	1599	Bacteria	Bacteria	52.8	0.025	NTclustered	gi\|2254134276\|gb\|CP015487.1\|	1599	g1817	i0	94.118	0.12639405204461	34	2	13	0	92	125	1607396	1607429	Latilactobacillus sakei strain TMW 1.46 chromosome, complete genome	blastn	34	52.8	1	Bacteria		Bacillati	Bacillota	Bacilli	Lactobacillales	Lactobacillaceae	Latilactobacillus	Latilactobacillus sakei
26591747	26591747	PRJNA1040136_S_NODE_1621_length_279_cov_1.048544_g1618_i0	PRJNA1040136	1621	279	1.048544	2.92543776	Gallionella sp.	2052161	Bacteria	Bacteria	78.2	1.94e-14	NR	MFA6972877.1	2052161	g1618	i0	68	0.537634408602151	50	16	53.8	0	278	129	535	584	MFA6972877.1 hypothetical protein [Gallionella sp.]	diamond	150	78.2	1	Bacteria		Pseudomonadati	Pseudomonadota	Betaproteobacteria	Nitrosomonadales	Gallionellaceae	Gallionella	Gallionella sp.
27003376	27003376	PRJNA1040136_S_NODE_2862_length_232_cov_2.276730_g2859_i0	PRJNA1040136	2862	232	2.27673	5.2820136	Streptococcus anginosus	1328	Bacteria	Bacteria	79	1.35e-15	NR	WP_336374935.1	1328	g2859	i0	96	0.646551724137931	50	2	64.7	0	160	11	1	50	WP_336374935.1 hypothetical protein, partial [Streptococcus anginosus]	diamond	150	79	1	Bacteria		Bacillati	Bacillota	Bacilli	Lactobacillales	Streptococcaceae	Streptococcus	Streptococcus anginosus
27667236	27667236	PRJNA1040136_S_NODE_1664_length_276_cov_2.576355_g1661_i0	PRJNA1040136	1664	276	2.576355	7.1107398	Bacteroidia bacterium	2044936	Bacteria	Bacteria	178	1.7e-52	NR	HRA60763.1	2044936	g1661	i0	96.7	1	92	3	100	0	276	1	290	381	HRA60763.1 phage/plasmid replication protein [Bacteroidia bacterium]	diamond	276	178	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Bacteroidia				Bacteroidia bacterium
27793461	27793461	PRJNA1040136_S_NODE_2124_length_257_cov_1.255435_g2121_i0	PRJNA1040136	2124	257	1.255435	3.22646795	Chryseobacterium sp.	1871047	Bacteria	Bacteria	92.8	1.01e-19	NR	TXI87065.1	1871047	g2121	i0	67.7	0.75875486381323	65	20	74.7	1	255	64	485	549	TXI87065.1 MAG: ribonucleoside-diphosphate reductase subunit alpha [Chryseobacterium sp.]	diamond	195	92.8	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Flavobacteriia	Flavobacteriales	Weeksellaceae	Chryseobacterium	Chryseobacterium sp.
28038025	28038025	PRJNA1040136_S_NODE_1945_length_264_cov_5.031414_g1942_i0	PRJNA1040136	1945	264	5.031414	13.28293296	Bacteria	2	Bacteria	Bacteria	46.2	0.00285	NR	MEM8946921.1	2026780	g1942	i0	37	1.18181818181818	46	29	52.3	0	61	198	240	285	MEM8946921.1 YiiX/YebB-like N1pC/P60 family cysteine hydrolase [Planctomycetota bacterium]	diamond	312	46.6	0.991416309012876	Bacteria	PVC group	Pseudomonadati	Planctomycetota					Planctomycetota bacterium
28456544	28456544	PRJNA1040136_S_NODE_1286_length_298_cov_4.413333_g1283_i0	PRJNA1040136	1286	298	4.413333	13.15173234	bacterium	1869227	Bacteria	Bacteria	76.6	2.16e-15	NR	MFQ5906323.1	1869227	g1283	i0	58.2	1.29865771812081	67	27	67.4	1	277	77	66	131	MFQ5906323.1 nucleoside-diphosphate kinase [bacterium]	diamond	387	76.6	1	Bacteria								bacterium
28551295	28551295	PRJNA1040136_S_NODE_2847_length_233_cov_2.443750_g2844_i0	PRJNA1040136	2847	233	2.44375	5.6939375	bacterium	1869227	Bacteria	Bacteria	54.7	8.16e-8	NR	MFN9908776.1	1869227	g2844	i0	77.4	0.399141630901288	31	7	39.9	0	233	141	27	57	MFN9908776.1 hypothetical protein [bacterium]	diamond	93	54.7	1	Bacteria								bacterium
29056436	29056436	PRJNA1040136_S_NODE_2768_length_241_cov_0.863095_g2765_i0	PRJNA1040136	2768	241	0.863095	2.08005895	Candidatus Altimarinota bacterium	2044595	Bacteria	Bacteria	50.1	9.2e-5	NR	MBP7806593.1	2044595	g2765	i0	48.2	0.697095435684647	56	27	69.7	1	241	74	189	242	MBP7806593.1 A/G-specific adenine glycosylase [Candidatus Altimarinota bacterium]	diamond	168	50.1	1	Bacteria	Bacteria candidate phyla		Candidatus Altimarinota					Candidatus Altimarinota bacterium
29372100	29372100	PRJNA1040136_S_NODE_1049_length_315_cov_1.409091_g1046_i0	PRJNA1040136	1049	315	1.409091	4.43863665	Chitinophagaceae bacterium	1869212	Bacteria	Bacteria	149	1.49e-44	NR	MBP6625264.1	1869212	g1046	i0	98.7	0.723809523809524	76	1	72.4	0	258	31	1	76	MBP6625264.1 hypothetical protein [Chitinophagaceae bacterium]	diamond	228	149	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Chitinophagia	Chitinophagales	Chitinophagaceae		Chitinophagaceae bacterium
29971979	29971979	PRJNA1040136_S_NODE_1351_length_295_cov_1.436937_g1348_i0	PRJNA1040136	1351	295	1.436937	4.23896415	Lachnospiraceae bacterium	1898203	Bacteria	Bacteria	82	3.12e-17	NR	MDD3412370.1	1898203	g1348	i0	43.8	0.905084745762712	89	49	89.5	1	7	270	70	158	MDD3412370.1 hypothetical protein [Lachnospiraceae bacterium]	diamond	267	82	1	Bacteria		Bacillati	Bacillota	Clostridia	Lachnospirales	Lachnospiraceae		Lachnospiraceae bacterium
30098278	30098278	PRJNA1040136_S_NODE_1432_length_290_cov_1.239631_g1429_i0	PRJNA1040136	1432	290	1.239631	3.5949299	Algoriphagus locisalis	305507	Bacteria	Bacteria	45.8	0.00393	NR	WP_091698113.1	305507	g1429	i0	28	0.962068965517241	93	62	91	2	288	25	47	139	WP_091698113.1 hypothetical protein [Algoriphagus locisalis]	diamond	279	45.8	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Cytophagia	Cytophagales	Cyclobacteriaceae	Algoriphagus	Algoriphagus locisalis
30161350	30161350	PRJNA1040136_S_NODE_332_length_452_cov_6.596306_g329_i0	PRJNA1040136	332	452	6.596306	29.81530312	Bacteroidaceae bacterium	2212467	Bacteria	Bacteria	48.9	0.00188	NR	MBQ5627129.1	2212467	g329	i0	33	1.26106194690265	97	59	60.4	2	440	168	208	304	MBQ5627129.1 5'-nucleotidase [Bacteroidaceae bacterium]	diamond	570	48.9	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Bacteroidia	Bacteroidales	Bacteroidaceae		Bacteroidaceae bacterium
30572100	30572100	PRJNA1040136_S_NODE_1573_length_281_cov_1.024038_g1570_i0	PRJNA1040136	1573	281	1.024038	2.87754678	Patescibacteria group bacterium	2052139	Bacteria	Bacteria	113	6.61e-27	NR	MEK7180008.1	2052139	g1570	i0	56.9	2.1779359430605	102	34	98.2	1	280	5	260	361	MEK7180008.1 hypothetical protein [Patescibacteria group bacterium]	diamond	612	113	1	Bacteria	Bacteria candidate phyla							Patescibacteria group bacterium
32121776	32121776	PRJNA1040136_S_NODE_258_length_482_cov_2.823961_g255_i0	PRJNA1040136	258	482	2.823961	13.61149202	Pseudomonadota bacterium	1977087	Bacteria	Bacteria	65.1	9.07e-10	NR	NBP02836.1	1977087	g255	i0	37.4	0.566390041493776	91	47	53.5	2	8	265	57	142	NBP02836.1 hypothetical protein [Pseudomonadota bacterium]	diamond	273	65.1	1	Bacteria		Pseudomonadati	Pseudomonadota					Pseudomonadota bacterium
32248480	32248480	PRJNA1040136_S_NODE_498_length_404_cov_2.948640_g495_i0	PRJNA1040136	498	404	2.94864	11.9125056	Bacteroidia bacterium	2044936	Bacteria	Bacteria	50.4	3.84e-4	NR	HRA60763.1	2044936	g495	i0	88.9	0.200495049504951	27	3	20	0	99	19	1	27	HRA60763.1 phage/plasmid replication protein [Bacteroidia bacterium]	diamond	81	50.4	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Bacteroidia				Bacteroidia bacterium
32311741	32311741	PRJNA1040136_S_NODE_139_length_565_cov_2.447154_g136_i0	PRJNA1040136	139	565	2.447154	13.8264201	Staphylococcus pseudintermedius	283734	Bacteria	Bacteria	110	9.68e-28	NR	WP_222114562.1	283734	g136	i0	100	1.6141592920354	76	0	40.4	0	228	1	1	76	WP_222114562.1 hypothetical protein, partial [Staphylococcus pseudintermedius]	diamond	912	110	1	Bacteria		Bacillati	Bacillota	Bacilli	Bacillales	Staphylococcaceae	Staphylococcus	Staphylococcus pseudintermedius

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;