RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1040136" and tax_phylum = "Cressdnaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1040136 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3558787 3558787 PRJNA1040136_S_NODE_43_length_842_cov_3.534460_g40_i0 PRJNA1040136 43 842 3.53446 29.7601532 Circovirus 39725 Viruses Viruses 1539 0   NTclustered gi|2717314922|gb|OR224879.1| 1964372 g40 i0 100 3.80047505938242 833 0 99 0 10 842 1782 2614 Circovirus sp. isolate C25N74/AU, complete genome blastn 3200 1539 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Circoviridae Circovirus Circovirus sp.
15035808 15035808 PRJNA1040136_S_NODE_1212_length_303_cov_1.947826_g1209_i0 PRJNA1040136 1212 303 1.947826 5.90191278 Circovirus 39725 Viruses Viruses 556 4.91e-154   NTclustered gi|2496529047|gb|OP564891.1| 1964372 g1209 i0 100 5.05940594059406 301 0 99 0 1 301 3682 3382 Circovirus sp. strain OBP1/FE1/23/2022, complete genome blastn 1533 556 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Circoviridae Circovirus Circovirus sp.
16310517 16310517 PRJNA1040136_S_NODE_1033_length_316_cov_2.930041_g1030_i0 PRJNA1040136 1033 316 2.930041 9.25892956 Circovirus 39725 Viruses Viruses 558 1.43e-154   NTclustered gi|2717314922|gb|OR224879.1| 1964372 g1030 i0 100 3.92405063291139 302 0 96 0 15 316 96 397 Circovirus sp. isolate C25N74/AU, complete genome blastn 1240 558 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Circoviridae Circovirus Circovirus sp.
30509142 30509142 PRJNA1040136_S_NODE_2193_length_254_cov_2.116022_g2190_i0 PRJNA1040136 2193 254 2.116022 5.37469588 Cressdnaviricota sp. 2748378 Viruses Viruses 53.9 1.85e-6   NR DAO41666.1 2748378 g2190 i0 39.1 0.81496062992126 69 41 80.3 1 6 209 66 134 DAO41666.1 MAG TPA: hypothetical protein [Cressdnaviricota sp.] diamond 207 53.9 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;