metadata: contig_metadata: 14 rows where bioproject = "PRJNA1040136", tax_kingdom = "Pseudomonadati" and tax

14 rows where bioproject = "PRJNA1040136", tax_kingdom = "Pseudomonadati" and tax_superkingdom = "Bacteria"

descending

Link	rowid ▼	query	bioproject	node	length	coverage	rel_abundance	taxname_lca	taxid_lca	taxoncategory	taxoncategorysimple	bits	evalue	analysis_used	target	taxid	gene	allele	pident	sumperc_cov	alnlen	mismatch	qcov	gapopen	qstart	qend	tstart	tend	target_title	analysis	sumalnlen	maxbits	bits_percmax	tax_superkingdom	tax_clade	tax_kingdom	tax_phylum	tax_class	tax_order	tax_family	tax_genus	tax_species
1444408	1444408	PRJNA1040136_S_NODE_2762_length_241_cov_0.916667_g2759_i0	PRJNA1040136	2762	241	0.916667	2.20916747	root	1	Root_unresolved	Root_unresolved	115	1.29e-30	NR	WP_205637565.1	470	g2759	i0	89.1	12.7095435684647	64	7	79.7	0	1	192	89	152	WP_205637565.1 histone H2B family protein, partial [Acinetobacter baumannii]	diamond	3063	115	1	Bacteria		Pseudomonadati	Pseudomonadota	Gammaproteobacteria	Moraxellales	Moraxellaceae	Acinetobacter	Acinetobacter baumannii
7822346	7822346	PRJNA1040136_S_NODE_147_length_559_cov_2.481481_g144_i0	PRJNA1040136	147	559	2.481481	13.87147879	Planctomycetota bacterium	2026780	Bacteria	Bacteria	54.7	0.015	NTclustered	gi\|2621706020\|emb\|OY764082.1\|	2026780	g144	i0	96.875	0.21824686940966	32	1	6	0	25	56	522043	522074	MAG: Planctomycetota bacterium isolate b62d8c61-b663-4402-817f-8d709632624f genome assembly, chromosome: 1	blastn	122	54.7	1	Bacteria	PVC group	Pseudomonadati	Planctomycetota					Planctomycetota bacterium
14198346	14198346	PRJNA1040136_S_NODE_592_length_382_cov_4.200647_g589_i0	PRJNA1040136	592	382	4.200647	16.04647154	Flavobacterium dauae	1563479	Bacteria	Bacteria	56.5	0.003	NTclustered	gi\|2557430891\|gb\|CP130821.1\|	1563479	g589	i0	100	0.0785340314136126	30	0	8	0	265	294	1161409	1161438	Flavobacterium dauae strain TCH3-2 chromosome, complete genome	blastn	30	56.5	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Flavobacteriia	Flavobacteriales	Flavobacteriaceae	Flavobacterium	Flavobacterium dauae
15472563	15472563	PRJNA1040136_S_NODE_1653_length_277_cov_1.073529_g1650_i0	PRJNA1040136	1653	277	1.073529	2.97367533	Flavobacterium ammonificans	1751056	Bacteria	Bacteria	484	2.1199999999999996e-132	NTclustered	gi\|2119752067\|dbj\|AP025185.1\|	1751056	g1650	i0	98.195	1.9927797833935	277	5	100	0	1	277	1055518	1055794	Flavobacterium ammonificans SHINM13 DNA, complete genome	blastn	552	484	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Flavobacteriia	Flavobacteriales	Flavobacteriaceae	Flavobacterium	Flavobacterium ammonificans
20570913	20570913	PRJNA1040136_S_NODE_1517_length_284_cov_1.957346_g1514_i0	PRJNA1040136	1517	284	1.957346	5.55886264	Vibrio gallaecicus	552386	Bacteria	Bacteria	52.8	0.026	NTclustered	gi\|2271101991\|dbj\|AP025490.1\|	552386	g1514	i0	100	0.0985915492957746	28	0	10	0	1	28	1609580	1609553	Vibrio gallaecicus CECT 7244 DNA, chromosome 1, complete sequence	blastn	28	52.8	1	Bacteria		Pseudomonadati	Pseudomonadota	Gammaproteobacteria	Vibrionales	Vibrionaceae	Vibrio	Vibrio gallaecicus
26591747	26591747	PRJNA1040136_S_NODE_1621_length_279_cov_1.048544_g1618_i0	PRJNA1040136	1621	279	1.048544	2.92543776	Gallionella sp.	2052161	Bacteria	Bacteria	78.2	1.94e-14	NR	MFA6972877.1	2052161	g1618	i0	68	0.537634408602151	50	16	53.8	0	278	129	535	584	MFA6972877.1 hypothetical protein [Gallionella sp.]	diamond	150	78.2	1	Bacteria		Pseudomonadati	Pseudomonadota	Betaproteobacteria	Nitrosomonadales	Gallionellaceae	Gallionella	Gallionella sp.
27667236	27667236	PRJNA1040136_S_NODE_1664_length_276_cov_2.576355_g1661_i0	PRJNA1040136	1664	276	2.576355	7.1107398	Bacteroidia bacterium	2044936	Bacteria	Bacteria	178	1.7e-52	NR	HRA60763.1	2044936	g1661	i0	96.7	1	92	3	100	0	276	1	290	381	HRA60763.1 phage/plasmid replication protein [Bacteroidia bacterium]	diamond	276	178	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Bacteroidia				Bacteroidia bacterium
27793461	27793461	PRJNA1040136_S_NODE_2124_length_257_cov_1.255435_g2121_i0	PRJNA1040136	2124	257	1.255435	3.22646795	Chryseobacterium sp.	1871047	Bacteria	Bacteria	92.8	1.01e-19	NR	TXI87065.1	1871047	g2121	i0	67.7	0.75875486381323	65	20	74.7	1	255	64	485	549	TXI87065.1 MAG: ribonucleoside-diphosphate reductase subunit alpha [Chryseobacterium sp.]	diamond	195	92.8	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Flavobacteriia	Flavobacteriales	Weeksellaceae	Chryseobacterium	Chryseobacterium sp.
28038025	28038025	PRJNA1040136_S_NODE_1945_length_264_cov_5.031414_g1942_i0	PRJNA1040136	1945	264	5.031414	13.28293296	Bacteria	2	Bacteria	Bacteria	46.2	0.00285	NR	MEM8946921.1	2026780	g1942	i0	37	1.18181818181818	46	29	52.3	0	61	198	240	285	MEM8946921.1 YiiX/YebB-like N1pC/P60 family cysteine hydrolase [Planctomycetota bacterium]	diamond	312	46.6	0.991416309012876	Bacteria	PVC group	Pseudomonadati	Planctomycetota					Planctomycetota bacterium
29372100	29372100	PRJNA1040136_S_NODE_1049_length_315_cov_1.409091_g1046_i0	PRJNA1040136	1049	315	1.409091	4.43863665	Chitinophagaceae bacterium	1869212	Bacteria	Bacteria	149	1.49e-44	NR	MBP6625264.1	1869212	g1046	i0	98.7	0.723809523809524	76	1	72.4	0	258	31	1	76	MBP6625264.1 hypothetical protein [Chitinophagaceae bacterium]	diamond	228	149	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Chitinophagia	Chitinophagales	Chitinophagaceae		Chitinophagaceae bacterium
30098278	30098278	PRJNA1040136_S_NODE_1432_length_290_cov_1.239631_g1429_i0	PRJNA1040136	1432	290	1.239631	3.5949299	Algoriphagus locisalis	305507	Bacteria	Bacteria	45.8	0.00393	NR	WP_091698113.1	305507	g1429	i0	28	0.962068965517241	93	62	91	2	288	25	47	139	WP_091698113.1 hypothetical protein [Algoriphagus locisalis]	diamond	279	45.8	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Cytophagia	Cytophagales	Cyclobacteriaceae	Algoriphagus	Algoriphagus locisalis
30161350	30161350	PRJNA1040136_S_NODE_332_length_452_cov_6.596306_g329_i0	PRJNA1040136	332	452	6.596306	29.81530312	Bacteroidaceae bacterium	2212467	Bacteria	Bacteria	48.9	0.00188	NR	MBQ5627129.1	2212467	g329	i0	33	1.26106194690265	97	59	60.4	2	440	168	208	304	MBQ5627129.1 5'-nucleotidase [Bacteroidaceae bacterium]	diamond	570	48.9	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Bacteroidia	Bacteroidales	Bacteroidaceae		Bacteroidaceae bacterium
32121776	32121776	PRJNA1040136_S_NODE_258_length_482_cov_2.823961_g255_i0	PRJNA1040136	258	482	2.823961	13.61149202	Pseudomonadota bacterium	1977087	Bacteria	Bacteria	65.1	9.07e-10	NR	NBP02836.1	1977087	g255	i0	37.4	0.566390041493776	91	47	53.5	2	8	265	57	142	NBP02836.1 hypothetical protein [Pseudomonadota bacterium]	diamond	273	65.1	1	Bacteria		Pseudomonadati	Pseudomonadota					Pseudomonadota bacterium
32248480	32248480	PRJNA1040136_S_NODE_498_length_404_cov_2.948640_g495_i0	PRJNA1040136	498	404	2.94864	11.9125056	Bacteroidia bacterium	2044936	Bacteria	Bacteria	50.4	3.84e-4	NR	HRA60763.1	2044936	g495	i0	88.9	0.200495049504951	27	3	20	0	99	19	1	27	HRA60763.1 phage/plasmid replication protein [Bacteroidia bacterium]	diamond	81	50.4	1	Bacteria	FCB group	Pseudomonadati	Bacteroidota	Bacteroidia				Bacteroidia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;