contig_metadata
11 rows where bioproject = "PRJNA1040136" and tax_kingdom = "Fungi"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6547781 | 6547781 | PRJNA1040136_S_NODE_2506_length_246_cov_0.890173_g2503_i0 | PRJNA1040136 | 2506 | 246 | 0.890173 | 2.18982558 | Agaricomycetes | 155619 | Fungi | Fungi | 93.6 | 4.85e-20 | NR | XP_007385161.1 | 741275 | g2503 | i0 | 71.4 | 2.30487804878049 | 63 | 18 | 76.8 | 0 | 245 | 57 | 577 | 639 | XP_007385161.1 succinate dehydrogenase [Punctularia strigosozonata HHB-11173 SS5] | diamond | 567 | 94.4 | 0.991525423728813 | Eukaryota | Opisthokonta | Fungi | Basidiomycota | Agaricomycetes | Corticiales | Punctulariaceae | Punctularia | Punctularia strigosozonata | |
| 7822344 | 7822344 | PRJNA1040136_S_NODE_1287_length_298_cov_3.702222_g1284_i0 | PRJNA1040136 | 1287 | 298 | 3.702222 | 11.03262156 | Rhizophagus irregularis DAOM 197198w | 1432141 | Fungi | Fungi | 73.2 | 8.55e-15 | NR | EXX72692.1 | 1432141 | g1284 | i0 | 71.2 | 1.22818791946309 | 52 | 15 | 52.3 | 0 | 296 | 141 | 1 | 52 | EXX72692.1 ribosomal 60S subunit protein L29 [Rhizophagus irregularis DAOM 197198w] | diamond | 366 | 73.2 | 1 | Eukaryota | Opisthokonta | Fungi | Mucoromycota | Glomeromycetes | Glomerales | Glomeraceae | Rhizophagus | Rhizophagus irregularis | |
| 14198340 | 14198340 | PRJNA1040136_S_NODE_1452_length_288_cov_2.009302_g1449_i0 | PRJNA1040136 | 1452 | 288 | 2.009302 | 5.78678976 | Mycotypha africana | 64632 | Fungi | Fungi | 73.1 | 2.05e-8 | NTclustered | gi|2432566343|ref|XM_053075701.1| | 64632 | g1449 | i0 | 85.714 | 3.86805555555556 | 70 | 8 | 24 | 2 | 171 | 239 | 919 | 851 | Mycotypha africana ribosomal protein L6, alpha-beta domain-containing protein (BDF20DRAFT_540539), mRNA | blastn | 1114 | 73.1 | 1 | Eukaryota | Opisthokonta | Fungi | Mucoromycota | Mucoromycetes | Mucorales | Mycotyphaceae | Mycotypha | Mycotypha africana | |
| 14198347 | 14198347 | PRJNA1040136_S_NODE_772_length_347_cov_1.791971_g769_i0 | PRJNA1040136 | 772 | 347 | 1.791971 | 6.21813937 | Rhodonia placenta | 104341 | Fungi | Fungi | 54.7 | 0.009 | NTclustered | gi|1372293348|ref|XM_024487651.1| | 670580 | g769 | i0 | 100 | 0.0835734870317003 | 29 | 0 | 8 | 0 | 297 | 325 | 122 | 150 | Postia placenta MAD-698-R-SB12 hypothetical protein (POSPLADRAFT_1161136), partial mRNA | blastn | 29 | 54.7 | 1 | Eukaryota | Opisthokonta | Fungi | Basidiomycota | Agaricomycetes | Polyporales | Adustoporiaceae | Rhodonia | Rhodonia placenta | |
| 16746717 | 16746717 | PRJNA1040136_S_NODE_1214_length_303_cov_1.682609_g1211_i0 | PRJNA1040136 | 1214 | 303 | 1.682609 | 5.09830527 | Cordyceps militaris | 73501 | Fungi | Fungi | 104 | 7.68e-18 | NTclustered | gi|573975827|ref|XM_006665796.1| | 983644 | g1211 | i0 | 92.958 | 0.234323432343234 | 71 | 5 | 23 | 0 | 64 | 134 | 1 | 71 | Cordyceps militaris CM01 uncharacterized protein (CCM_00636), partial mRNA | blastn | 71 | 104 | 1 | Eukaryota | Opisthokonta | Fungi | Ascomycota | Sordariomycetes | Hypocreales | Cordycipitaceae | Cordyceps | Cordyceps militaris | |
| 21846684 | 21846684 | PRJNA1040136_S_NODE_2198_length_254_cov_1.690608_g2195_i0 | PRJNA1040136 | 2198 | 254 | 1.6906080000000001 | 4.29414432 | Opisthokonta | 33154 | Fungi | Fungi | 87 | 1.11e-17 | NR | KAJ3204786.1 | 109932 | g2195 | i0 | 64.1 | 3.56692913385827 | 78 | 26 | 89.8 | 1 | 2 | 229 | 45 | 122 | KAJ3204786.1 60S ribosomal protein L34 [Entophlyctis luteolus] | diamond | 906 | 87.8 | 0.990888382687927 | Eukaryota | Opisthokonta | Fungi | Chytridiomycota | Chytridiomycetes | Chytridiales | Chytriomycetaceae | Entophlyctis | Entophlyctis luteolus | |
| 22684974 | 22684974 | PRJNA1040136_S_NODE_278_length_471_cov_2.384422_g275_i0 | PRJNA1040136 | 278 | 471 | 2.384422 | 11.23062762 | root | 1 | Root_unresolved | Root_unresolved | 870 | 0 | NTclustered | gi|822603163|emb|LN831877.1| | 4932 | g275 | i0 | 100 | 74.5626326963907 | 471 | 0 | 100 | 0 | 1 | 471 | 535 | 1005 | Saccharomyces cerevisiae YPL248C/GAL4 gene for transcription factor, strain 6320-A7 | blastn | 35119 | 870 | 1 | Eukaryota | Opisthokonta | Fungi | Ascomycota | Saccharomycetes | Saccharomycetales | Saccharomycetaceae | Saccharomyces | Saccharomyces cerevisiae | |
| 25234364 | 25234364 | PRJNA1040136_S_NODE_760_length_349_cov_1.782609_g757_i0 | PRJNA1040136 | 760 | 349 | 1.782609 | 6.22130541 | Pichiomycetes | 3239874 | Fungi | Fungi | 113 | 1.49e-20 | NTclustered | gi|126132391|ref|XM_001382684.1| | 322104 | g757 | i0 | 89.773 | 16.8424068767908 | 88 | 9 | 25 | 0 | 94 | 181 | 360 | 447 | Scheffersomyces stipitis CBS 6054 40S ribosomal protein S14 (RSP14), mRNA | blastn | 5878 | 113 | 1 | Eukaryota | Opisthokonta | Fungi | Ascomycota | Pichiomycetes | Serinales | Debaryomycetaceae | Scheffersomyces | Scheffersomyces stipitis | |
| 29182782 | 29182782 | PRJNA1040136_S_NODE_1349_length_295_cov_1.581081_g1346_i0 | PRJNA1040136 | 1349 | 295 | 1.581081 | 4.66418895 | Pilaira anomala | 64641 | Fungi | Fungi | 104 | 2.52e-26 | NR | KAI9348827.1 | 64641 | g1346 | i0 | 71.2 | 0.671186440677966 | 66 | 19 | 67.1 | 0 | 1 | 198 | 58 | 123 | KAI9348827.1 profilin [Pilaira anomala] | diamond | 198 | 104 | 1 | Eukaryota | Opisthokonta | Fungi | Mucoromycota | Mucoromycetes | Mucorales | Mucoraceae | Pilaira | Pilaira anomala | |
| 31299092 | 31299092 | PRJNA1040136_S_NODE_775_length_347_cov_1.124088_g772_i0 | PRJNA1040136 | 775 | 347 | 1.124088 | 3.90058536 | Meyerozyma sp. JA9 | 2028340 | Fungi | Fungi | 53.5 | 3.53e-6 | NR | RLV83189.1 | 2028340 | g772 | i0 | 54 | 0.873198847262248 | 50 | 23 | 43.2 | 0 | 11 | 160 | 85 | 134 | RLV83189.1 60S ribosomal protein L14-B [Meyerozyma sp. JA9] | diamond | 303 | 53.5 | 1 | Eukaryota | Opisthokonta | Fungi | Ascomycota | Pichiomycetes | Serinales | Debaryomycetaceae | Meyerozyma | Meyerozyma sp. JA9 | |
| 31860249 | 31860249 | PRJNA1040136_S_NODE_1837_length_269_cov_1.040816_g1834_i0 | PRJNA1040136 | 1837 | 269 | 1.040816 | 2.79979504 | Chytriomycetaceae | 1352827 | Fungi | Fungi | 65.1 | 6.56e-10 | NR | KAJ3025000.1 | 2723227 | g1834 | i0 | 78.8 | 2.91078066914498 | 33 | 7 | 36.8 | 0 | 2 | 100 | 382 | 414 | KAJ3025000.1 hypothetical protein HDU68_007572 [Siphonaria sp. JEL0065] | diamond | 783 | 65.1 | 1 | Eukaryota | Opisthokonta | Fungi | Chytridiomycota | Chytridiomycetes | Chytridiales | Chytriomycetaceae | Siphonaria | Siphonaria sp. JEL0065 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;