RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1040136", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1040136 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9097329 9097329 PRJNA1040136_S_NODE_128_length_579_cov_7.579051_g125_i0 PRJNA1040136 128 579 7.579051 43.88270529 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 54.7 0.016   NTclustered gi|1191051559|ref|XM_021047964.1| 2652724 g125 i0 100 0.0500863557858377 29 0 5 0 382 410 3846 3818 PREDICTED: Exaiptasia diaphana monocarboxylate transporter 10 (LOC110242031), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
32240372 32240372 PRJNA1040136_S_NODE_2538_length_245_cov_1.343023_g2535_i0 PRJNA1040136 2538 245 1.343023 3.29040635 Metazoa 33208 Cnidaria other_Eukaryota 64.3 1.95e-10   NR XP_012553648.1 6087 g2535 i0 61 7.56734693877551 59 21 72.2 1 245 69 127 183 XP_012553648.1 large ribosomal subunit protein uL22 isoform X1 [Hydra vulgaris] diamond 1854 64.7 0.993817619783617 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;