RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1040136", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1040136 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21846684 21846684 PRJNA1040136_S_NODE_2198_length_254_cov_1.690608_g2195_i0 PRJNA1040136 2198 254 1.6906080000000001 4.29414432 Opisthokonta 33154 Fungi Fungi 87 1.11e-17   NR KAJ3204786.1 109932 g2195 i0 64.1 3.56692913385827 78 26 89.8 1 2 229 45 122 KAJ3204786.1 60S ribosomal protein L34 [Entophlyctis luteolus] diamond 906 87.8 0.990888382687927 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Entophlyctis Entophlyctis luteolus
31860249 31860249 PRJNA1040136_S_NODE_1837_length_269_cov_1.040816_g1834_i0 PRJNA1040136 1837 269 1.040816 2.79979504 Chytriomycetaceae 1352827 Fungi Fungi 65.1 6.56e-10   NR KAJ3025000.1 2723227 g1834 i0 78.8 2.91078066914498 33 7 36.8 0 2 100 382 414 KAJ3025000.1 hypothetical protein HDU68_007572 [Siphonaria sp. JEL0065] diamond 783 65.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Siphonaria Siphonaria sp. JEL0065

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;