RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1040136", tax_clade = "Opisthokonta" and tax_phylum = "Basidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1040136 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6547781 6547781 PRJNA1040136_S_NODE_2506_length_246_cov_0.890173_g2503_i0 PRJNA1040136 2506 246 0.890173 2.18982558 Agaricomycetes 155619 Fungi Fungi 93.6 4.85e-20   NR XP_007385161.1 741275 g2503 i0 71.4 2.30487804878049 63 18 76.8 0 245 57 577 639 XP_007385161.1 succinate dehydrogenase [Punctularia strigosozonata HHB-11173 SS5] diamond 567 94.4 0.991525423728813 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Corticiales Punctulariaceae Punctularia Punctularia strigosozonata
14198347 14198347 PRJNA1040136_S_NODE_772_length_347_cov_1.791971_g769_i0 PRJNA1040136 772 347 1.791971 6.21813937 Rhodonia placenta 104341 Fungi Fungi 54.7 0.009   NTclustered gi|1372293348|ref|XM_024487651.1| 670580 g769 i0 100 0.0835734870317003 29 0 8 0 297 325 122 150 Postia placenta MAD-698-R-SB12 hypothetical protein (POSPLADRAFT_1161136), partial mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Adustoporiaceae Rhodonia Rhodonia placenta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;