RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1040136" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1040136 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29056436 29056436 PRJNA1040136_S_NODE_2768_length_241_cov_0.863095_g2765_i0 PRJNA1040136 2768 241 0.863095 2.08005895 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 50.1 9.2e-5   NR MBP7806593.1 2044595 g2765 i0 48.2 0.697095435684647 56 27 69.7 1 241 74 189 242 MBP7806593.1 A/G-specific adenine glycosylase [Candidatus Altimarinota bacterium] diamond 168 50.1 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30572100 30572100 PRJNA1040136_S_NODE_1573_length_281_cov_1.024038_g1570_i0 PRJNA1040136 1573 281 1.024038 2.87754678 Patescibacteria group bacterium 2052139 Bacteria Bacteria 113 6.61e-27   NR MEK7180008.1 2052139 g1570 i0 56.9 2.1779359430605 102 34 98.2 1 280 5 260 361 MEK7180008.1 hypothetical protein [Patescibacteria group bacterium] diamond 612 113 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;