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contig_metadata

10 rows where bioproject = "PRJNA1040136" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 10 ✖

bioproject 1

  • PRJNA1040136 · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1444405 1444405 PRJNA1040136_S_NODE_1702_length_275_cov_1.143564_g1699_i0 PRJNA1040136 1702 275 1.143564 3.144801 Soliformovum expulsum 435423 Evosea other_Eukaryota 363 1.03e-95   NTclustered gi|260909293|gb|FJ766479.1| 435423 g1699 i0 90.775 72.1309090909091 271 25 99 0 1 271 883 1153 Soliformovum expulsum culture-collection ATCC:48083 clone pool B 18S ribosomal RNA gene, partial sequence blastn 19836 363 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum expulsum
19295579 19295579 PRJNA1040136_S_NODE_1596_length_280_cov_1.115942_g1593_i0 PRJNA1040136 1596 280 1.115942 3.1246376 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 138 3.03e-40   NR XP_004336922.1 1257118 g1593 i0 88.5 1.68214285714286 78 9 83.6 0 279 46 28 105 XP_004336922.1 ribosomal protein L44, putative [Acanthamoeba castellanii str. Neff] diamond 471 138 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19295582 19295582 PRJNA1040136_S_NODE_256_length_484_cov_1.600973_g253_i0 PRJNA1040136 256 484 1.600973 7.74870932 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 92 1.72e-20   NR KAH3763125.1 1580589 g253 i0 65.6 1.24586776859504 64 22 39.7 0 65 256 3 66 KAH3763125.1 60S acidic ribosomal protein P1 [Pelomyxa schiedti] diamond 603 92 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
24395798 24395798 PRJNA1040136_S_NODE_1880_length_267_cov_1.438144_g1877_i0 PRJNA1040136 1880 267 1.438144 3.83984448 Soliformovum irregulare 435424 Evosea other_Eukaryota 180 1.07e-40   NTclustered gi|146448863|gb|EF513199.1| 435424 g1877 i0 92.126 38.0524344569288 127 10 48 0 1 127 1082 1208 Soliformovum irregulare elongation factor 1A (EF1A) gene, partial cds blastn 10160 180 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum irregulare
28393240 28393240 PRJNA1040136_S_NODE_1726_length_274_cov_0.960199_g1723_i0 PRJNA1040136 1726 274 0.960199 2.63094526 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 111 3.41e-29   NR XP_004339529.1 1257118 g1723 i0 78.6 1.85036496350365 56 12 61.3 0 5 172 85 140 XP_004339529.1 Ctype lysozyme/alpha-lactalbumin superfamily protein [Acanthamoeba castellanii str. Neff] diamond 507 111 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29624136 29624136 PRJNA1040136_S_NODE_870_length_334_cov_1.666667_g867_i0 PRJNA1040136 870 334 1.666667 5.56666778 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 60.1 3.37e-8   NR XP_647039.1 352472 g867 i0 34.1 0.736526946107784 82 51 73.7 2 266 21 25 103 XP_647039.1 hypothetical protein DDB_G0268890 [Dictyostelium discoideum AX4] diamond 246 60.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
29655796 29655796 PRJNA1040136_S_NODE_2550_length_245_cov_0.895349_g2547_i0 PRJNA1040136 2550 245 0.895349 2.19360505 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 49.7 1.3e-4   NR PRP85618.1 1890364 g2547 i0 44.3 0.746938775510204 61 33 73.5 1 226 47 297 357 PRP85618.1 Wiskott-Aldrich syndrome-like [Planoprotostelium fungivorum] diamond 183 49.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30003714 30003714 PRJNA1040136_S_NODE_2371_length_249_cov_0.897727_g2368_i0 PRJNA1040136 2371 249 0.897727 2.23534023 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 47.4 9.35e-4   NR PRP77967.1 1890364 g2368 i0 29.6 0.855421686746988 71 49 85.5 1 7 219 343 412 PRP77967.1 hypothetical protein PROFUN_14071 [Planoprotostelium fungivorum] diamond 213 47.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30035277 30035277 PRJNA1040136_S_NODE_1491_length_286_cov_1.314554_g1488_i0 PRJNA1040136 1491 286 1.314554 3.75962444 Cavenderia fasciculata 261658 Evosea other_Eukaryota 83.2 3.82e-16   NR XP_004350707.1 261658 g1488 i0 54.7 1.57342657342657 75 34 78.7 0 286 62 626 700 XP_004350707.1 uncharacterized protein DFA_11760 [Cavenderia fasciculata] diamond 450 83.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
31235725 31235725 PRJNA1040136_S_NODE_1395_length_292_cov_1.931507_g1392_i0 PRJNA1040136 1395 292 1.931507 5.64000044 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 131 1.73e-37   NR PRP89405.1 1890364 g1392 i0 77.2 0.811643835616438 79 18 81.2 0 292 56 13 91 PRP89405.1 40S ribosomal protein S21 [Planoprotostelium fungivorum] diamond 237 131 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;