RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1036688" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1036688 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9097219 9097219 PRJNA1036688_P_NODE_10828_length_162_cov_1.248000_g10536_i0 PRJNA1036688 10828 162 1.248 2.02176 Calicophoron daubneyi 300641 Platyhelminthes Platyhelminthes 89.4 1.5e-19   NR CAL5138391.1 300641 g10536 i0 77.4 0.981481481481482 53 12 98.1 0 3 161 217 269 CAL5138391.1 unnamed protein product [Calicophoron daubneyi] diamond 159 89.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Paramphistomidae Calicophoron Calicophoron daubneyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;