RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1036688", tax_kingdom = "Orthornavirae" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 1 ✖

tax_kingdom 1

  • Orthornavirae · 1 ✖

bioproject 1

  • PRJNA1036688 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20570839 20570839 PRJNA1036688_P_NODE_5817_length_245_cov_1.985577_g5525_i0 PRJNA1036688 5817 245 1.985577 4.86466365 Ripasluq virus 3131229 Viruses Viruses 270 5.609999999999999e-68   NTclustered gi|2717321969|gb|PP173531.1| 3131229 g5525 i0 86.777 473.975510204082 242 32 99 0 3 244 3240 2999 MAG: Ripasluq virus isolate MP3_k141_106077 genomic sequence blastn 116124 270 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripasluq virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;