RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1036688", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1036688 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7385851 7385851 PRJNA1036688_P_NODE_2986_length_385_cov_1.876437_g2696_i0 PRJNA1036688 2986 385 1.876437 7.22428245 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 163 2.19e-48   NR XP_065070902.1 499914 g2696 i0 72.6 1.63636363636364 106 26 82.6 1 384 67 79 181 XP_065070902.1 LOW QUALITY PROTEIN: large ribosomal subunit protein uL15-like [Rhopilema esculentum] diamond 630 163 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
30659079 30659079 PRJNA1036688_P_NODE_6173_length_235_cov_2.348485_g5881_i0 PRJNA1036688 6173 235 2.348485 5.51893975 Metazoa 33208 Cnidaria other_Eukaryota 103 1.82e-25   NR XP_001639879.2 45351 g5881 i0 67.6 10.9021276595745 71 23 90.6 0 20 232 37 107 XP_001639879.2 40S ribosomal protein S11 [Nematostella vectensis] diamond 2562 103 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;