RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1036688", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1036688 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1444364 1444364 PRJNA1036688_P_NODE_8782_length_184_cov_1.816327_g8490_i0 PRJNA1036688 8782 184 1.816327 3.34204168 Siboglinum fiordicum 27908 Annelida Annelida 340 2.99e-89   NTclustered gi|297001|emb|Z21526.1| 27908 g8490 i0 100 5.0054347826087 184 0 100 0 1 184 419 236 S.fiordicum 28S rRNA gene blastn 921 340 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Siboglinum Siboglinum fiordicum
18021563 18021563 PRJNA1036688_P_NODE_8355_length_190_cov_1.764706_g8063_i0 PRJNA1036688 8355 190 1.764706 3.3529414 Hirudo verbana 311461 Annelida Annelida 54.7 0.005   NTclustered gi|2918369616|emb|OZ237781.1| 311461 g8063 i0 100 0.610526315789474 29 0 15 0 90 118 1073810 1073838 Hirudo verbana genome assembly, chromosome: 3 blastn 116 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;