RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1036688", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1036688 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26877249 26877249 PRJNA1036688_P_NODE_9241_length_178_cov_1.936170_g8949_i0 PRJNA1036688 9241 178 1.93617 3.4463826 Smittium culicis 133412 Fungi Fungi 85.9 5.42e-20   NR OMJ15099.1 133412 g8949 i0 62.5 2.8314606741573 56 21 94.4 0 177 10 52 107 OMJ15099.1 60S ribosomal protein L33-A [Smittium culicis] diamond 504 85.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Smittium Smittium culicis
32525229 32525229 PRJNA1036688_P_NODE_2539_length_429_cov_2.079082_g2250_i0 PRJNA1036688 2539 429 2.079082 8.91926178 Fungi 4751 Fungi Fungi 160 1.0099999999999999e-47   NR RKP11106.1 78915 g2250 i0 70.2 3.25174825174825 114 33 79.7 1 3 344 20 132 RKP11106.1 60S ribosomal protein L32 [Thamnocephalis sphaerospora] diamond 1395 160 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Sigmoideomycetaceae Thamnocephalis Thamnocephalis sphaerospora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;