RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA1036688" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 9 ✖

bioproject 1

  • PRJNA1036688 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
169654 169654 PRJNA1036688_P_NODE_5601_length_252_cov_1.762791_g5309_i0 PRJNA1036688 5601 252 1.762791 4.44223332 Methanoculleus chikugoensis 118126 Archaea Archaea 283 7.44e-72   NTclustered gi|2047647073|dbj|AP019781.1| 118126 g5309 i0 86.957 75.7063492063492 253 32 100 1 1 252 2159490 2159238 Methanoculleus chikugoensis MG62 DNA, complete genome blastn 19078 283 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus chikugoensis
1008085 1008085 PRJNA1036688_P_NODE_2281_length_459_cov_2.272512_g1992_i0 PRJNA1036688 2281 459 2.272512 10.43083008 Methanothrix 2222 Archaea Archaea 523 7.849999999999998e-144   NTclustered gi|507148322|ref|NR_103125.1| 2223 g1992 i0 98.644 165.294117647059 295 4 64 0 1 295 1819 2113 Methanosaeta concilii strain GP6 23S ribosomal RNA gene, complete sequence blastn 75870 523 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
3996125 3996125 PRJNA1036688_P_NODE_11204_length_158_cov_2.710744_g10912_i0 PRJNA1036688 11204 158 2.710744 4.28297552 uncultured Methanomicrobiales archaeon 183760 Archaea Archaea 246 5.58e-61   NTclustered gi|2874253666|emb|OY969100.1| 183760 g10912 i0 94.904 224.664556962025 157 8 99 0 2 158 1372482 1372638 MAG: uncultured Methanomicrobiales archaeon isolate MFD10007.bin.c.6 genome assembly, chromosome: 1 blastn 35497 246 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     uncultured Methanomicrobiales archaeon
8661253 8661253 PRJNA1036688_P_NODE_3187_length_368_cov_2.283988_g2897_i0 PRJNA1036688 3187 368 2.283988 8.40507584 Methanosphaerula 475087 Archaea Archaea 446 1.3699999999999999e-120   NTclustered gi|470483922|ref|NR_076620.1| 475088 g2897 i0 88.649 146.75 370 37 100 4 1 368 1830 1464 Methanosphaerula palustris strain E1-9c 23S ribosomal RNA gene, complete sequence blastn 54004 446 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanosphaerula Methanosphaerula palustris
15035767 15035767 PRJNA1036688_P_NODE_432_length_1100_cov_3.863594_g277_i0 PRJNA1036688 432 1100 3.863594 42.499534 Methanothrix 2222 Archaea Archaea 2026 0   NTclustered gi|507148322|ref|NR_103125.1| 2223 g277 i0 99.909 226.567272727273 1100 1 100 0 1 1100 1825 726 Methanosaeta concilii strain GP6 23S ribosomal RNA gene, complete sequence blastn 249224 2026 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
20570862 20570862 PRJNA1036688_P_NODE_877_length_758_cov_2.436893_g655_i0 PRJNA1036688 877 758 2.436893 18.47164894 Methanothrix soehngenii 2223 Archaea Archaea 918 0   NTclustered gi|328927127|gb|CP002565.1| 990316 g655 i0 99.8 73.5263852242744 500 1 100 0 1 500 293663 293164 Methanosaeta concilii GP-6, complete genome blastn 55733 918 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
21410120 21410120 PRJNA1036688_P_NODE_1637_length_550_cov_2.775828_g1357_i0 PRJNA1036688 1637 550 2.775828 15.267054 root 1 Root_unresolved Root_unresolved 924 0   NTclustered gi|44504|emb|X16932.1| 2223 g1357 i0 97.761 99.72 536 12 97 0 1 536 1467 932 Methanothrix soehngenii gene for 16S ribosomal RNA blastn 54846 924 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
22684960 22684960 PRJNA1036688_P_NODE_9058_length_180_cov_3.244755_g8766_i0 PRJNA1036688 9058 180 3.244755 5.840559 Methanothrix 2222 Archaea Archaea 333 4.87e-87   NTclustered gi|507148322|ref|NR_103125.1| 2223 g8766 i0 100 11.9 180 0 100 0 1 180 572 751 Methanosaeta concilii strain GP6 23S ribosomal RNA gene, complete sequence blastn 2142 333 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
22684963 22684963 PRJNA1036688_P_NODE_9498_length_175_cov_2.521739_g9206_i0 PRJNA1036688 9498 175 2.521739 4.41304325 Methanothrix 2222 Archaea Archaea 324 2.83e-84   NTclustered gi|507148322|ref|NR_103125.1| 2223 g9206 i0 100 66.1885714285714 175 0 100 0 1 175 2227 2401 Methanosaeta concilii strain GP6 23S ribosomal RNA gene, complete sequence blastn 11583 324 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;