RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1035005" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1035005 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27414675 27414675 PRJNA1035005_P_NODE_28203_length_285_cov_1.330189_g27797_i0 PRJNA1035005 28203 285 1.330189 3.79103865 Thermoproteota archaeon 2056631 Archaea Archaea 58.5 9.32e-8   NR RDJ35000.1 2056631 g27797 i0 42.1 0.8 76 42 80 1 3 230 129 202 RDJ35000.1 MAG: hypothetical protein DWQ19_09200 [Thermoproteota archaeon] diamond 228 58.5 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
30098242 30098242 PRJNA1035005_P_NODE_17772_length_310_cov_3.160338_g17366_i0 PRJNA1035005 17772 310 3.160338 9.7970478 Desulfurococcaceae archaeon 2184738 Archaea Archaea 89.4 5.89e-19   NR MEM4976427.1 2184738 g17366 i0 43.8 1.72258064516129 96 41 80.3 1 281 33 78 173 MEM4976427.1 hypothetical protein [Desulfurococcaceae archaeon] diamond 534 89.4 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae   Desulfurococcaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;