RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1035005" and tax_phylum = "Preaxostyla"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1035005 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
169180 169180 PRJNA1035005_P_NODE_8721_length_380_cov_1.263844_g8319_i0 PRJNA1035005 8721 380 1.263844 4.8026072 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 86.7 4.19e-19   NR KAJ4453711.1 342808 g8319 i0 56.8 1.22368421052632 81 29 61.6 2 16 249 2 79 KAJ4453711.1 putative 60S acidic ribosomal protein P1 [Paratrimastix pyriformis] diamond 465 86.7 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
5271729 5271729 PRJNA1035005_P_NODE_45585_length_262_cov_1.846561_g45179_i0 PRJNA1035005 45585 262 1.846561 4.83798982 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 5.14e-4   NTclustered gi|2794943111|ref|XM_067867156.1| 2049356 g45179 i0 97.059 0.129770992366412 34 1 13 0 63 96 3186 3219 Monocercomonoides exilis putative AAA family ATPase (MONOS_1436), partial mRNA blastn 34 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
16746048 16746048 PRJNA1035005_P_NODE_70234_length_247_cov_0.896552_g69828_i0 PRJNA1035005 70234 247 0.896552 2.21448344 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.022   NTclustered gi|2794978635|ref|XM_067874591.1| 2049356 g69828 i0 100 0.11336032388664 28 0 11 0 182 209 1995 1968 Monocercomonoides exilis uncharacterized protein (MONOS_4512), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
31868306 31868306 PRJNA1035005_P_NODE_78497_length_244_cov_1.502924_g78091_i0 PRJNA1035005 78497 244 1.502924 3.66713456 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 84 7.32e-17   NR KAJ4460283.1 342808 g78091 i0 52.5 0.983606557377049 80 38 98.4 0 242 3 234 313 KAJ4460283.1 putative SPFH domain/Band 7 family protein [Paratrimastix pyriformis] diamond 240 84 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;