RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA1035005" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1035005 · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6546787 6546787 PRJNA1035005_P_NODE_23906_length_290_cov_2.239631_g23500_i0 PRJNA1035005 23906 290 2.239631 6.4949299 brine shrimp partitivirus 3 2900394 Viruses Viruses 536 6.079999999999999e-148   NTclustered gi|2209094945|gb|OL472544.1| 2900394 g23500 i0 100 15.5103448275862 290 0 100 0 1 290 2017 2306 MAG: Brine shrimp partitivirus 3 isolate SD/17-18 RNA-dependent RNA polymerase gene, complete cds blastn 4498 536 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partitivirus 3
11211175 11211175 PRJNA1035005_P_NODE_4669_length_493_cov_1.164286_g4269_i0 PRJNA1035005 4669 493 1.164286 5.73992998 Viruses 10239 Viruses Viruses 889 0   NTclustered gi|2209094941|gb|OL472542.1| 2900394 g4269 i0 99.19 15.030425963488799 494 3 100 1 1 493 566 73 MAG: Brine shrimp partitivirus 3 isolate SD/11-18 RNA-dependent RNA polymerase gene, complete cds blastn 7410 894 0.994407158836689 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partitivirus 3
11647185 11647185 PRJNA1035005_P_NODE_1110_length_1275_cov_1.503328_g862_i0 PRJNA1035005 1110 1275 1.503328 19.167432 Zebrafish picornavirus 1 2304617 Viruses Viruses 2106 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g862 i0 96.471 3 1275 45 100 0 1 1275 7864 6590 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 3825 2106 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
11647232 11647232 PRJNA1035005_P_NODE_17690_length_311_cov_1.310924_g17284_i0 PRJNA1035005 17690 311 1.310924 4.07697364 Zebrafish picornavirus 1 2304617 Viruses Viruses 514 3.08e-141   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g17284 i0 96.463 3 311 11 100 0 1 311 3548 3238 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 933 514 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
14197356 14197356 PRJNA1035005_P_NODE_2232_length_781_cov_2.843220_g1861_i0 PRJNA1035005 2232 781 2.84322 22.2055482 Penaeus vannamei partiti-like virus 1 3119342 Viruses Viruses 1375 0   NTclustered gi|2697475300|gb|PP215226.1| 3119342 g1861 i0 99.866 3.6235595390525 747 1 96 0 35 781 2080 1334 Penaeus vannamei partiti-like virus 1 isolate 03/SD/202005 hypothetical protein gene, complete cds blastn 2830 1375 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Penaeus vannamei partiti-like virus 1
14197533 14197533 PRJNA1035005_P_NODE_44552_length_264_cov_1.162304_g44146_i0 PRJNA1035005 44552 264 1.162304 3.06848256 Zebrafish picornavirus 1 2304617 Viruses Viruses 444 3.41e-120   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g44146 i0 96.97 3 264 8 100 0 1 264 4817 4554 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 792 444 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
22684609 22684609 PRJNA1035005_P_NODE_22358_length_292_cov_2.114155_g21952_i0 PRJNA1035005 22358 292 2.114155 6.1733326 Viruses 10239 Viruses Viruses 540 4.74e-149   NTclustered gi|2209094941|gb|OL472542.1| 2900394 g21952 i0 100 15 292 0 100 0 1 292 1438 1147 MAG: Brine shrimp partitivirus 3 isolate SD/11-18 RNA-dependent RNA polymerase gene, complete cds blastn 4380 540 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partitivirus 3
32501480 32501480 PRJNA1035005_P_NODE_13539_length_333_cov_1.107692_g13133_i0 PRJNA1035005 13539 333 1.107692 3.68861436 brine shrimp dicistrovirus 1 2900466 Viruses Viruses 61.2 3.41e-8   NR UNI73824.1 2900466 g13133 i0 45 0.540540540540541 60 33 54.1 0 182 3 649 708 UNI73824.1 MAG: capsid protein [brine shrimp dicistrovirus 1] diamond 180 61.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   brine shrimp dicistrovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;