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contig_metadata

16 rows where bioproject = "PRJNA1035005" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA1035005 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2719039 2719039 PRJNA1035005_P_NODE_10183_length_362_cov_1.605536_g9778_i0 PRJNA1035005 10183 362 1.605536 5.81204032 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 652 0   NTclustered gi|817491030|gb|KP273902.1| 175275 g9778 i0 99.171 99.5082872928177 362 3 100 0 1 362 17 378 Uncultured cercozoan clone EHUR-35 18S ribosomal RNA gene, partial sequence blastn 36022 652 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
2719088 2719088 PRJNA1035005_P_NODE_1583_length_987_cov_5.768053_g1258_i0 PRJNA1035005 1583 987 5.768053 56.93068311 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 313 1.12e-103   NR MES1912193.1 1215613 g1258 i0 67.9 7.96656534954407 234 75 71.1 0 904 203 6 239 MES1912193.1 60S ribosomal protein L7B [Cercozoa sp. M6MM] diamond 7863 313 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
3995315 3995315 PRJNA1035005_P_NODE_33004_length_278_cov_2.658537_g32598_i0 PRJNA1035005 33004 278 2.658537 7.39073286 Paulinella chromatophora 39717 SAR_Eukaryotes SAR_Eukaryotes 126 1.49e-24   NTclustered gi|238617606|gb|FJ973381.1| 39717 g32598 i0 86.441 29.3201438848921 118 13 42 2 102 218 1937 1822 Paulinella chromatophora strain FK01 28S ribosomal RNA gene, partial sequence blastn 8151 126 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
6546759 6546759 PRJNA1035005_P_NODE_20186_length_299_cov_3.867257_g19780_i0 PRJNA1035005 20186 299 3.867257 11.56309843 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 303 6.95e-78   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g19780 i0 85.382 51.5819397993311 301 34 99 10 1 296 3713 4008 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 15423 303 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
14197296 14197296 PRJNA1035005_P_NODE_1452_length_1053_cov_4.357143_g1147_i0 PRJNA1035005 1452 1053 4.357143 45.880715790000004 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 357 1.3099999999999994e-119   NR MES1911029.1 1215613 g1147 i0 61.6 0.897435897435897 315 106 88.3 5 36 965 1 305 MES1911029.1 hypothetical protein [Cercozoa sp. M6MM] diamond 945 357 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
19294508 19294508 PRJNA1035005_P_NODE_2356_length_752_cov_7.863034_g1981_i0 PRJNA1035005 2356 752 7.863034 59.13001568 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 286 1.53e-95   NR ADK47156.1 323453 g1981 i0 96.6 0.578457446808511 145 5 57.8 0 707 273 1 145 ADK47156.1 ribosomal protein S23a [Heteromita sp. PRA-74] diamond 435 286 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
19294681 19294681 PRJNA1035005_P_NODE_4696_length_492_cov_1.116945_g4296_i0 PRJNA1035005 4696 492 1.116945 5.4953694 Gymnochlora stellata 67809 SAR_Eukaryotes SAR_Eukaryotes 241 1.2500000000000001e-77   NR ACF24562.1 67809 g4296 i0 73.8 0.975609756097561 160 42 97.6 0 3 482 57 216 ACF24562.1 proteasome alpha 5 subunit [Gymnochlora stellata] diamond 480 241 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Gymnochlora Gymnochlora stellata
19294747 19294747 PRJNA1035005_P_NODE_5576_length_450_cov_1.843501_g5176_i0 PRJNA1035005 5576 450 1.843501 8.2957545 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 638 2.63e-178   NTclustered gi|290760486|gb|GQ144689.1| 361427 g5176 i0 92.222 100.748888888889 450 35 100 0 1 450 2106 1657 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 45337 638 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
20569933 20569933 PRJNA1035005_P_NODE_3037_length_633_cov_7.450000_g2648_i0 PRJNA1035005 3037 633 7.45 47.1585 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 256 1.0699999999999999e-84   NR ADK26622.1 323453 g2648 i0 94.6 0.616113744075829 130 7 61.6 0 584 195 1 130 ADK26622.1 rps22a [Heteromita sp. PRA-74] diamond 390 256 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
24394824 24394824 PRJNA1035005_P_NODE_29920_length_282_cov_3.196172_g29514_i0 PRJNA1035005 29920 282 3.196172 9.01320504 Amorphochlora amoebiformis 1561963 SAR_Eukaryotes SAR_Eukaryotes 300 8.41e-77   NTclustered gi|33346934|gb|AY251797.1| 1561963 g29514 i0 88.889 81.1950354609929 243 27 86 0 40 282 227 469 Lotharella amoeboformis ubiquitin/actin fusion protein 2 gene, partial cds blastn 22897 300 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Amorphochlora Amorphochlora amoebiformis
27951243 27951243 PRJNA1035005_P_NODE_42285_length_266_cov_2.404145_g41879_i0 PRJNA1035005 42285 266 2.404145 6.3950257 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 89.4 5.12e-19   NR MES1911486.1 1215613 g41879 i0 52.3 0.992481203007519 88 40 99.2 1 264 1 127 212 MES1911486.1 hypothetical protein [Cercozoa sp. M6MM] diamond 264 89.4 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
28898244 28898244 PRJNA1035005_P_NODE_3248_length_608_cov_3.345794_g2858_i0 PRJNA1035005 3248 608 3.345794 20.34242752 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 181 2.2299999999999998e-54   NR AAT09077.1 227086 g2858 i0 59 0.769736842105263 156 62 77 1 32 499 1 154 AAT09077.1 transcription factor BTF3 [Bigelowiella natans] diamond 468 181 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
29498261 29498261 PRJNA1035005_P_NODE_30590_length_282_cov_1.110048_g30184_i0 PRJNA1035005 30590 282 1.110048 3.13033536 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 64.7 1.09e-9   NR MES1914001.1 1215613 g30184 i0 46.7 0.978723404255319 92 46 97.9 2 6 281 298 386 MES1914001.1 hypothetical protein [Cercozoa sp. M6MM] diamond 276 64.7 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
29719034 29719034 PRJNA1035005_P_NODE_11130_length_352_cov_2.075269_g10725_i0 PRJNA1035005 11130 352 2.075269 7.30494688 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 114 4.25e-27   NR MES1909771.1 1215613 g10725 i0 47.3 0.954545454545455 112 59 95.5 0 345 10 52 163 MES1909771.1 hypothetical protein [Cercozoa sp. M6MM] diamond 336 114 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31267484 31267484 PRJNA1035005_P_NODE_62795_length_250_cov_0.881356_g62389_i0 PRJNA1035005 62795 250 0.881356 2.20339 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 125 6.129999999999999e-32   NR MES1911740.1 1215613 g62389 i0 74.4 1.968 82 21 98.4 0 3 248 253 334 MES1911740.1 hypothetical protein [Cercozoa sp. M6MM] diamond 492 125 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32469816 32469816 PRJNA1035005_P_NODE_17359_length_312_cov_2.422594_g16953_i0 PRJNA1035005 17359 312 2.422594 7.55849328 Gymnochlora stellata 67809 SAR_Eukaryotes SAR_Eukaryotes 97.4 9.36e-23   NR ACF24574.1 67809 g16953 i0 93.9 0.471153846153846 49 3 47.1 0 3 149 11 59 ACF24574.1 Ras-related small GTPase Rab5 [Gymnochlora stellata] diamond 147 97.4 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Gymnochlora Gymnochlora stellata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;