RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1035005", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA1035005 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26932270 26932270 PRJNA1035005_P_NODE_76362_length_245_cov_0.906977_g75956_i0 PRJNA1035005 76362 245 0.906977 2.22209365 Synergistales 649776 Bacteria Bacteria 114 2.54e-28   NR WP_302364743.1 638849 g75956 i0 66.7 6.8938775510204104 81 27 99.2 0 243 1 24 104 WP_302364743.1 baseplate assembly protein [Pyramidobacter piscolens] diamond 1689 114 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Pyramidobacter Pyramidobacter piscolens
28038015 28038015 PRJNA1035005_P_NODE_67565_length_248_cov_0.891429_g67159_i0 PRJNA1035005 67565 248 0.891429 2.21074392 Bacteria 2 Bacteria Bacteria 60.1 3.07e-8   NR NLV81954.1 2053624 g67159 i0 48.2 1.35483870967742 56 29 67.7 0 247 80 620 675 NLV81954.1 type I restriction endonuclease subunit R [Synergistaceae bacterium] diamond 336 60.5 0.993388429752066 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;