RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1035005", tax_kingdom = "Orthornavirae" and tax_phylum = "Duplornaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 4 ✖

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA1035005 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16745751 16745751 PRJNA1035005_P_NODE_29894_length_283_cov_0.952381_g29488_i0 PRJNA1035005 29894 283 0.952381 2.69523823 Orthoreovirus piscis 3431498 Viruses Viruses 213 1.13e-50   NTclustered gi|2634039173|gb|OR872662.1| 1157337 g29488 i0 86.979 9.82685512367491 192 21 67 4 46 234 2101 1911 Piscine orthoreovirus isolate WADDL:2021-1143 mu1 protein gene, partial cds blastn 2781 213 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Orthoreovirus Orthoreovirus piscis
19294940 19294940 PRJNA1035005_P_NODE_81516_length_243_cov_1.429412_g81110_i0 PRJNA1035005 81516 243 1.429412 3.47347116 brine shrimp toti-like virus 1 2900477 Viruses Viruses 431 2.4099999999999995e-116   NTclustered gi|2209095021|gb|OL472797.1| 2900477 g81110 i0 98.765 4 243 2 100 1 1 243 5574 5333 MAG: Brine shrimp toti-like virus 1 isolate SD/11-18 capsid protein and RNA-dependent RNA polymerase genes, complete cds blastn 972 431 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   brine shrimp toti-like virus 1
21845687 21845687 PRJNA1035005_P_NODE_29358_length_283_cov_1.833333_g28952_i0 PRJNA1035005 29358 283 1.833333 5.18833239 Orthoreovirus piscis 3431498 Viruses Viruses 239 1.87e-58   NTclustered gi|2634039173|gb|OR872662.1| 1157337 g28952 i0 88.119 29.5583038869258 202 22 73 2 84 283 2124 1923 Piscine orthoreovirus isolate WADDL:2021-1143 mu1 protein gene, partial cds blastn 8365 239 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Orthoreovirus Orthoreovirus piscis
26686855 26686855 PRJNA1035005_P_NODE_9521_length_370_cov_1.047138_g9117_i0 PRJNA1035005 9521 370 1.047138 3.8744106 Malassezia restricta virus MrV4 76775 Viruses Viruses 178 3.479999999999999e-55   NR QJA42333.1 2727864 g9117 i0 73 0.9 111 30 90 0 366 34 14 124 QJA42333.1 hypothetical protein MRV40S_001 [Malassezia restricta virus MrV40S] diamond 333 178 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40S

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;