RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1035005", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1035005 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21845934 21845934 PRJNA1035005_P_NODE_62218_length_250_cov_0.881356_g61812_i0 PRJNA1035005 62218 250 0.881356 2.20339 Mitosporidium daphniae 1485682 Fungi Fungi 169 1.6999999999999998e-48   NR XP_013237581.1 1485682 g61812 i0 98.8 0.996 83 1 99.6 0 2 250 223 305 XP_013237581.1 uncharacterized protein DI09_43p40 [Mitosporidium daphniae] diamond 249 169 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
27982773 27982773 PRJNA1035005_P_NODE_76165_length_245_cov_0.906977_g75759_i0 PRJNA1035005 76165 245 0.906977 2.22209365 Nematocida minor 1912983 Fungi Fungi 49.3 1.43e-4   NR XP_051333937.1 1912983 g75759 i0 62.2 0.453061224489796 37 14 45.3 0 41 151 121 157 XP_051333937.1 dihydrofolate reductase [Nematocida minor] diamond 111 49.3 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida minor
29182746 29182746 PRJNA1035005_P_NODE_46629_length_261_cov_1.622340_g46223_i0 PRJNA1035005 46629 261 1.62234 4.2343074 Mitosporidium daphniae 1485682 Fungi Fungi 108 3.41e-25   NR XP_013237920.1 1485682 g46223 i0 67.4 0.988505747126437 86 24 98.9 1 4 261 955 1036 XP_013237920.1 uncharacterized protein DI09_33p100 [Mitosporidium daphniae] diamond 258 108 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
32847864 32847864 PRJNA1035005_P_NODE_31980_length_280_cov_1.333333_g31574_i0 PRJNA1035005 31980 280 1.333333 3.7333324 Mitosporidium daphniae 1485682 Fungi Fungi 130 6.519999999999999e-34   NR XP_013238634.1 1485682 g31574 i0 69.6 0.985714285714286 92 28 98.6 0 278 3 6 97 XP_013238634.1 uncharacterized protein DI09_1p570 [Mitosporidium daphniae] diamond 276 130 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;