RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1035005", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1035005 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28582815 28582815 PRJNA1035005_P_NODE_90347_length_210_cov_4.503650_g89940_i0 PRJNA1035005 90347 210 4.50365 9.457665 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 43.5 0.0129   NR HEX2230376.1 2838779 g89940 i0 38.5 0.742857142857143 52 29 74.3 1 3 158 418 466 HEX2230376.1 alanine--tRNA ligase [Candidatus Binatia bacterium] diamond 156 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29971932 29971932 PRJNA1035005_P_NODE_20871_length_297_cov_1.044643_g20465_i0 PRJNA1035005 20871 297 1.044643 3.10258971 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 43.1 0.047   NR MFI5365794.1 2838779 g20465 i0 42.1 0.383838383838384 38 22 38.4 0 180 293 25 62 MFI5365794.1 YcbK family protein [Candidatus Binatia bacterium] diamond 114 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32501488 32501488 PRJNA1035005_P_NODE_5279_length_462_cov_1.519280_g4879_i0 PRJNA1035005 5279 462 1.51928 7.0190736 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 129 2.03e-32   NR HVI08880.1 2838779 g4879 i0 52.9 0.993506493506494 153 53 98.7 6 458 3 106 240 HVI08880.1 hypothetical protein [Candidatus Binatia bacterium] diamond 459 129 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;