RNAquarium Metadata Server
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contig_metadata

19 rows where bioproject = "PRJNA1034995", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 19 ✖

tax_phylum 1

  • Kitrinoviricota · 19 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1034995 · 19 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
168510 168510 PRJNA1034995_S_NODE_40341_length_203_cov_3.725000_g40185_i0 PRJNA1034995 40341 203 3.725 7.56175 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.005   NTclustered gi|1995060321|gb|MN450069.1| 12164 g40185 i0 100 0.694581280788177 29 0 14 0 175 203 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
2718826 2718826 PRJNA1034995_S_NODE_21443_length_362_cov_12.686520_g21287_i0 PRJNA1034995 21443 362 12.68652 45.9252024 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.01   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g21287 i0 100 0.157458563535912 29 0 8 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
2718959 2718959 PRJNA1034995_S_NODE_39143_length_209_cov_8.180723_g38987_i0 PRJNA1034995 39143 209 8.180723 17.09771107 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.005   NTclustered gi|1995060321|gb|MN450069.1| 12164 g38987 i0 100 0.674641148325359 29 0 14 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
3995009 3995009 PRJNA1034995_S_NODE_31544_length_258_cov_2.990698_g31388_i0 PRJNA1034995 31544 258 2.990698 7.71600084 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.007   NTclustered gi|1995060321|gb|MN450069.1| 12164 g31388 i0 100 0.546511627906977 29 0 11 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
3995039 3995039 PRJNA1034995_S_NODE_35184_length_232_cov_7.380952_g35028_i0 PRJNA1034995 35184 232 7.380952 17.12380864 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g35028 i0 100 0.607758620689655 29 0 13 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
6110871 6110871 PRJNA1034995_S_NODE_35525_length_230_cov_5.914439_g35369_i0 PRJNA1034995 35525 230 5.914439 13.6032097 root 1 Root_unresolved Root_unresolved 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g35369 i0 100 0.647826086956522 29 0 13 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 149 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
6546434 6546434 PRJNA1034995_S_NODE_23166_length_339_cov_7.418919_g23010_i0 PRJNA1034995 23166 339 7.418919 25.15013541 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.009   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g23010 i0 100 0.168141592920354 29 0 9 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
8660817 8660817 PRJNA1034995_S_NODE_35707_length_229_cov_5.838710_g35551_i0 PRJNA1034995 35707 229 5.83871 13.3706459 root 1 Root_unresolved Root_unresolved 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g35551 i0 96.875 0.633187772925764 32 1 14 0 1 32 13 44 Carnation latent virus isolate KL, complete genome blastn 145 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
11646986 11646986 PRJNA1034995_S_NODE_28530_length_282_cov_10.849372_g28374_i0 PRJNA1034995 28530 282 10.849372 30.59522904 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.007   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g28374 i0 100 0.202127659574468 29 0 10 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
12922234 12922234 PRJNA1034995_S_NODE_39411_length_208_cov_2.884848_g39255_i0 PRJNA1034995 39411 208 2.884848 6.00048384 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.001   NTclustered gi|1995060321|gb|MN450069.1| 12164 g39255 i0 100 0.682692307692308 30 0 14 0 179 208 42 13 Carnation latent virus isolate KL, complete genome blastn 142 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
12922259 12922259 PRJNA1034995_S_NODE_42991_length_191_cov_1.101351_g42835_i0 PRJNA1034995 42991 191 1.101351 2.10358041 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.005   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g42835 i0 96.97 0.319371727748691 33 0 17 1 160 191 38 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 61 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
15471219 15471219 PRJNA1034995_S_NODE_18853_length_404_cov_28.565097_g18698_i0 PRJNA1034995 18853 404 28.565097 115.40299188 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.011   NTclustered gi|1995060321|gb|MN450069.1| 12164 g18698 i0 100 0.349009900990099 29 0 7 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
18020234 18020234 PRJNA1034995_S_NODE_22175_length_352_cov_12.249191_g22019_i0 PRJNA1034995 22175 352 12.249191 43.11715232 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.003   NTclustered gi|1995060321|gb|MN450069.1| 12164 g22019 i0 100 0.403409090909091 30 0 9 0 323 352 42 13 Carnation latent virus isolate KL, complete genome blastn 142 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
19294324 19294324 PRJNA1034995_S_NODE_42496_length_193_cov_3.060000_g42340_i0 PRJNA1034995 42496 193 3.06 5.9058 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.005   NTclustered gi|1995060321|gb|MN450069.1| 12164 g42340 i0 100 0.730569948186529 29 0 15 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
20569651 20569651 PRJNA1034995_S_NODE_35097_length_233_cov_3.147368_g34941_i0 PRJNA1034995 35097 233 3.147368 7.33336744 Carlavirus latensdianthi 3427766 Viruses Viruses 58.4 4.48e-4   NTclustered gi|1995060321|gb|MN450069.1| 12164 g34941 i0 100 0.613733905579399 31 0 13 0 1 31 13 43 Carnation latent virus isolate KL, complete genome blastn 143 58.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
21845387 21845387 PRJNA1034995_S_NODE_36358_length_225_cov_8.175824_g36202_i0 PRJNA1034995 36358 225 8.175824 18.395604 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g36202 i0 100 0.626666666666667 29 0 13 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
23120740 23120740 PRJNA1034995_S_NODE_39419_length_208_cov_2.606061_g39263_i0 PRJNA1034995 39419 208 2.606061 5.42060688 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.005   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g39263 i0 100 0.274038461538462 29 0 14 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
24394499 24394499 PRJNA1034995_S_NODE_26160_length_305_cov_8.618321_g26004_i0 PRJNA1034995 26160 305 8.618321 26.28587905 Carlavirus latensdianthi 3427766 Viruses Viruses 60.2 1.7e-4   NTclustered gi|1995060321|gb|MN450069.1| 12164 g26004 i0 97.222 0.311475409836066 36 0 12 1 270 305 42 8 Carnation latent virus isolate KL, complete genome blastn 95 60.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
24394627 24394627 PRJNA1034995_S_NODE_46100_length_178_cov_2.044444_g45944_i0 PRJNA1034995 46100 178 2.044444 3.63911032 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.015   NTclustered gi|1995060321|gb|MN450069.1| 12164 g45944 i0 100 0.157303370786517 28 0 16 0 1 28 15 42 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;