RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1034995" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1034995 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3994868 3994868 PRJNA1034995_S_NODE_15744_length_473_cov_25.553488_g15593_i0 PRJNA1034995 15744 473 25.553488 120.86799824 Orthoreovirus piscis 3431498 Viruses Viruses 244 7.07e-60   NTclustered gi|2634039173|gb|OR872662.1| 1157337 g15593 i0 89.055 8.99154334038055 201 16 55 5 100 296 1911 2109 Piscine orthoreovirus isolate WADDL:2021-1143 mu1 protein gene, partial cds blastn 4253 244 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Orthoreovirus Orthoreovirus piscis
11647065 11647065 PRJNA1034995_S_NODE_38570_length_212_cov_15.899408_g38414_i0 PRJNA1034995 38570 212 15.899408 33.70674496 Orthoreovirus piscis 3431498 Viruses Viruses 185 1.76e-42   NTclustered gi|2634039177|gb|OR872664.1| 1157337 g38414 i0 95.652 5.25471698113208 115 5 97 0 26 140 135 21 Piscine orthoreovirus isolate WADDL:2021-1143 lambda 3 protein gene, complete cds blastn 1114 185 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Orthoreovirus Orthoreovirus piscis
19294294 19294294 PRJNA1034995_S_NODE_37216_length_220_cov_6.056497_g37060_i0 PRJNA1034995 37216 220 6.056497 13.3242934 Orthoreovirus piscis 3431498 Viruses Viruses 171 5.15e-38   NTclustered gi|2634039173|gb|OR872662.1| 1157337 g37060 i0 91.803 10.4409090909091 122 10 57 0 1 122 2032 1911 Piscine orthoreovirus isolate WADDL:2021-1143 mu1 protein gene, partial cds blastn 2297 171 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Orthoreovirus Orthoreovirus piscis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;