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contig_metadata

9 rows where bioproject = "PRJNA1034995", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 9 ✖

tax_phylum 1

  • Acidobacteriota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1034995 · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7820971 7820971 PRJNA1034995_S_NODE_16247_length_459_cov_35.372596_g16094_i0 PRJNA1034995 16247 459 35.372596 162.36021564 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 579 1.6499999999999994e-160   NTclustered gi|84452201|emb|AM180899.1| 171953 g16094 i0 91.142 289.41394335512 429 35 93 3 13 440 1645 1219 Uncultured Acidobacteria bacterium partial 23S rRNA gene, clone LS_LKC11_kan2 blastn 132841 579 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
24394451 24394451 PRJNA1034995_S_NODE_19940_length_384_cov_73.595308_g19785_i0 PRJNA1034995 19940 384 73.595308 282.60598272 Acidobacteriota bacterium 1978231 Bacteria Bacteria 407 6.789999999999999e-109   NTclustered gi|1958093598|gb|CP065003.1| 1978231 g19785 i0 89.905 91.0260416666667 317 30 82 2 39 353 317239 317555 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome blastn 34954 407 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
26940066 26940066 PRJNA1034995_S_NODE_21042_length_368_cov_13.735385_g20886_i0 PRJNA1034995 21042 368 13.735385 50.5462168 Acidobacteriota bacterium 1978231 Bacteria Bacteria 68.2 3e-12   NR MDQ3714119.1 1978231 g20886 i0 87 0.375 46 6 37.5 0 192 55 1 46 MDQ3714119.1 hypothetical protein [Acidobacteriota bacterium] diamond 138 68.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27035136 27035136 PRJNA1034995_S_NODE_36922_length_222_cov_1.787709_g36766_i0 PRJNA1034995 36922 222 1.787709 3.96871398 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 78.2 1.72e-15   NR MCY7347090.1 2283092 g36766 i0 82.6 0.621621621621622 46 8 62.2 0 143 6 1 46 MCY7347090.1 CsbD family protein [Pyrinomonadaceae bacterium] diamond 138 78.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27193058 27193058 PRJNA1034995_S_NODE_15542_length_479_cov_21.094037_g15391_i0 PRJNA1034995 15542 479 21.094037 101.04043723 Acidobacteriota bacterium 1978231 Bacteria Bacteria 125 3.11e-30   NR MBA2606296.1 1978231 g15391 i0 82.4 3.30688935281837 68 12 42.6 0 274 477 62 129 MBA2606296.1 cytochrome c biogenesis protein CcsA [Acidobacteriota bacterium] diamond 1584 125 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28866788 28866788 PRJNA1034995_S_NODE_28168_length_285_cov_26.681818_g28012_i0 PRJNA1034995 28168 285 26.681818 76.0431813 Terriglobia bacterium 2081523 Bacteria Bacteria 46.6 0.00258   NR MYC65854.1 2081523 g28012 i0 39.2 0.536842105263158 51 31 53.7 0 95 247 178 228 MYC65854.1 sulfatase-like hydrolase/transferase [Terriglobia bacterium] diamond 153 46.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
28866790 28866790 PRJNA1034995_S_NODE_51188_length_160_cov_15.931624_g51032_i0 PRJNA1034995 51188 160 15.931624 25.4905984 Terracidiphilus sp. 1964191 Bacteria Bacteria 42.7 0.0114   NR HEX7729701.1 1964191 g51032 i0 41.7 0.9 48 28 90 0 158 15 213 260 HEX7729701.1 hypothetical protein [Terracidiphilus sp.] diamond 144 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
31140586 31140586 PRJNA1034995_S_NODE_28895_length_279_cov_7.677966_g28739_i0 PRJNA1034995 28895 279 7.677966 21.42152514 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 168 1.45e-50   NR MCY7344970.1 2283092 g28739 i0 95.3 0.924731182795699 86 4 92.5 0 260 3 43 128 MCY7344970.1 type IVB secretion system protein IcmH/DotU [Pyrinomonadaceae bacterium] diamond 258 168 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32216537 32216537 PRJNA1034995_S_NODE_31398_length_259_cov_4.472222_g31242_i0 PRJNA1034995 31398 259 4.472222 11.58305498 Acidobacteriota bacterium 1978231 Bacteria Bacteria 92 6.66e-21   NR MDQ3062607.1 1978231 g31242 i0 73.7 1.34362934362934 57 15 66 0 4 174 131 187 MDQ3062607.1 DinB family protein [Acidobacteriota bacterium] diamond 348 92 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;