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contig_metadata

15 rows where bioproject = "PRJNA1034995" and tax_kingdom = "Thermotogati"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 15 ✖

bioproject 1

  • PRJNA1034995 · 15 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2718854 2718854 PRJNA1034995_S_NODE_24603_length_321_cov_21.514388_g24447_i0 PRJNA1034995 24603 321 21.514388 69.06118548 Trueperaceae bacterium 2026798 Bacteria Bacteria 114 9.34e-27   NR MEX2542841.1 2026798 g24447 i0 55.7 3.98130841121495 106 47 99.1 0 319 2 722 827 MEX2542841.1 tetratricopeptide repeat protein [Trueperaceae bacterium] diamond 1278 114 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
3994875 3994875 PRJNA1034995_S_NODE_17284_length_436_cov_18.956743_g17129_i0 PRJNA1034995 17284 436 18.956743 82.65139948 Deinococcus soli (ex Cha et al. 2016) 1309411 Bacteria Bacteria 693 0   NTclustered gi|821341785|gb|CP011389.1| 1309411 g17129 i0 97.767 546.098623853211 403 8 92 1 27 428 1637984 1637582 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome blastn 238099 693 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus soli (ex Cha et al. 2016)
5271231 5271231 PRJNA1034995_S_NODE_21165_length_366_cov_14.777090_g21009_i0 PRJNA1034995 21165 366 14.77709 54.0841494 Bacteria 2 Bacteria Bacteria 131 5.07e-36   NR MEM7735398.1 1913990 g21009 i0 87.5 3.54098360655738 72 9 59 0 341 126 114 185 MEM7735398.1 elongation factor P [Deinococcota bacterium] diamond 1296 131 1 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
10371694 10371694 PRJNA1034995_S_NODE_31789_length_256_cov_5.755869_g31633_i0 PRJNA1034995 31789 256 5.755869 14.73502464 Deinococcus sp. YIM 77859 1540221 Bacteria Bacteria 63.5 1.98e-9   NR WP_034383094.1 1540221 g31633 i0 43.4 0.890625 76 41 86.7 1 248 27 79 154 WP_034383094.1 hypothetical protein [Deinococcus sp. YIM 77859] diamond 228 63.5 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. YIM 77859
12922014 12922014 PRJNA1034995_S_NODE_13811_length_537_cov_137.898785_g13668_i0 PRJNA1034995 13811 537 137.898785 740.51647545 uncultured Deinococcus sp. 158789 Bacteria Bacteria 929 0   NTclustered gi|199584206|gb|FJ028698.1| 158789 g13668 i0 100 91.2998137802607 503 0 94 0 1 503 503 1 Uncultured Deinococcus sp. clone SSB-84 16S ribosomal RNA gene, partial sequence blastn 49028 929 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus uncultured Deinococcus sp.
14196930 14196930 PRJNA1034995_S_NODE_12292_length_648_cov_22.277686_g12192_i0 PRJNA1034995 12292 648 22.277686 144.35940528 Truepera radiovictrix 332249 Bacteria Bacteria 236 4.3000000000000005e-74   NR WP_013178019.1 332249 g12192 i0 72.3 1.47222222222222 159 44 73.6 0 648 172 133 291 WP_013178019.1 carbohydrate ABC transporter permease [Truepera radiovictrix] diamond 954 236 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
14196939 14196939 PRJNA1034995_S_NODE_13352_length_558_cov_34.114563_g13213_i0 PRJNA1034995 13352 558 34.114563 190.35926154 Trueperaceae bacterium 2026798 Bacteria Bacteria 676 0   NTclustered gi|2108366028|gb|CP070651.1| 2026798 g13213 i0 88.632 126.123655913978 563 55 99 6 1 556 7687 8247 MAG: Trueperaceae bacterium isolate bin86 chromosome blastn 70377 676 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
18020169 18020169 PRJNA1034995_S_NODE_14415_length_514_cov_16.422505_g14267_i0 PRJNA1034995 14415 514 16.422505 84.4116757 Truepera radiovictrix 332249 Bacteria Bacteria 288 1.63e-93   NR WP_013178259.1 332249 g14267 i0 85.3 0.95136186770428 163 24 95.1 0 4 492 162 324 WP_013178259.1 asparagine--tRNA ligase [Truepera radiovictrix] diamond 489 288 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
26718195 26718195 PRJNA1034995_S_NODE_31961_length_255_cov_2.825472_g31805_i0 PRJNA1034995 31961 255 2.825472 7.2049536 uncultured Truepera sp. 543023 Bacteria Bacteria 126 8.53e-32   NR CAA9568595.1 543023 g31805 i0 80.5 0.905882352941176 77 14 89.4 1 26 253 424 500 CAA9568595.1 MAG: Aspartyl-tRNA synthetase [uncultured Truepera sp.] diamond 231 126 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera uncultured Truepera sp.
27382924 27382924 PRJNA1034995_S_NODE_26363_length_303_cov_5.980769_g26207_i0 PRJNA1034995 26363 303 5.980769 18.12173007 Trueperaceae bacterium 2026798 Bacteria Bacteria 95.9 1.63e-20   NR MCA9839205.1 2026798 g26207 i0 48 0.99009900990099 100 52 99 0 2 301 210 309 MCA9839205.1 ATP-binding protein [Trueperaceae bacterium] diamond 300 95.9 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
28416946 28416946 PRJNA1034995_S_NODE_26006_length_306_cov_27.882129_g25850_i0 PRJNA1034995 26006 306 27.882129 85.31931474 Bacteria 2 Bacteria Bacteria 40.8 0.0313   NR MDQ3397214.1 1913990 g25850 i0 56.4 0.803921568627451 39 17 38.2 0 143 259 4 42 MDQ3397214.1 type II secretion system GspH family protein [Deinococcota bacterium] diamond 246 41.2 0.990291262135922 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
29182729 29182729 PRJNA1034995_S_NODE_13289_length_562_cov_22.578035_g13150_i0 PRJNA1034995 13289 562 22.578035 126.8885567 Deinococcota bacterium 1913990 Bacteria Bacteria 278 3.3800000000000003e-91   NR MDQ3398552.1 1913990 g13150 i0 82 0.891459074733096 167 30 89.1 0 561 61 140 306 MDQ3398552.1 ABC transporter permease [Deinococcota bacterium] diamond 501 278 1 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
30288301 30288301 PRJNA1034995_S_NODE_17152_length_438_cov_33.582278_g16997_i0 PRJNA1034995 17152 438 33.582278 147.09037764 uncultured Truepera sp. 543023 Bacteria Bacteria 127 3.84e-33   NR CAA9585342.1 543023 g16997 i0 80.5 0.527397260273973 77 15 52.7 0 232 2 3 79 CAA9585342.1 MAG: Cytochrome c oxidase caa3-type assembly factor CtaG_BS (unrelated to Cox11-CtaG family) [uncultured Truepera sp.] diamond 231 127 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera uncultured Truepera sp.
30888257 30888257 PRJNA1034995_S_NODE_18714_length_407_cov_19.019231_g18559_i0 PRJNA1034995 18714 407 19.019231 77.40827017 Trueperaceae bacterium 2026798 Bacteria Bacteria 111 1.85e-25   NR MDZ7703625.1 2026798 g18559 i0 41.5 0.995085995085995 135 72 99.5 2 407 3 832 959 MDZ7703625.1 plasmid replication protein, CyRepA1 family [Trueperaceae bacterium] diamond 405 111 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
31299031 31299031 PRJNA1034995_S_NODE_15635_length_476_cov_30.505774_g15484_i0 PRJNA1034995 15635 476 30.505774 145.20748424 Truepera radiovictrix 332249 Bacteria Bacteria 177 9.83e-54   NR WP_013176733.1 332249 g15484 i0 53.1 1.02100840336134 162 68 98.3 4 6 473 16 175 WP_013176733.1 hypothetical protein [Truepera radiovictrix] diamond 486 177 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;