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contig_metadata

3 rows where bioproject = "PRJNA1034995" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA1034995 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10371703 10371703 PRJNA1034995_S_NODE_32849_length_248_cov_5.887805_g32693_i0 PRJNA1034995 32849 248 5.887805 14.6017564 uncultured crenarchaeote 29281 Archaea Archaea 357 4.24e-94   NTclustered gi|42557759|emb|AJ627422.1| 29281 g32693 i0 95.133 74.3225806451613 226 11 91 0 1 226 40742 40517 Uncultured crenarchaeote genomic fragment 54d9 blastn 18432 357 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
12922160 12922160 PRJNA1034995_S_NODE_31051_length_261_cov_30.614679_g30895_i0 PRJNA1034995 31051 261 30.614679 79.90431219 Fervidicoccus fontis 683846 Archaea Archaea 52.8 0.024   NTclustered gi|383794914|gb|CP003423.1| 1163730 g30895 i0 100 0.10727969348659 28 0 11 0 179 206 1010413 1010440 Fervidicoccus fontis Kam940, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Fervidicoccales Fervidicoccaceae Fervidicoccus Fervidicoccus fontis
27951235 27951235 PRJNA1034995_S_NODE_31765_length_256_cov_8.563380_g31609_i0 PRJNA1034995 31765 256 8.56338 21.9222528 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 169 8.36e-51   NR HET7242983.1 2169593 g31609 i0 98.7 2.77734375 79 1 92.6 0 19 255 115 193 HET7242983.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 711 169 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;