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contig_metadata

25 rows where bioproject = "PRJNA1034995", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 25 ✖

tax_kingdom 1

  • Metazoa · 25 ✖

tax_clade 1

bioproject 1

  • PRJNA1034995 · 25 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1443209 1443209 PRJNA1034995_S_NODE_34462_length_237_cov_4.268041_g34306_i0 PRJNA1034995 34462 237 4.268041 10.11525717 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.021   NTclustered gi|1557394408|emb|LR031564.1| 45931 g34306 i0 90.244 0.172995780590717 41 3 17 1 1 40 23 63 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 41 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
1443244 1443244 PRJNA1034995_S_NODE_40322_length_203_cov_4.343750_g40166_i0 PRJNA1034995 40322 203 4.34375 8.8178125 Pratylenchus vulnus 45931 Nematoda Nematoda 56.5 0.001   NTclustered gi|1557394408|emb|LR031564.1| 45931 g40166 i0 100 0.147783251231527 30 0 15 0 174 203 52 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
1443255 1443255 PRJNA1034995_S_NODE_42222_length_194_cov_4.867550_g42066_i0 PRJNA1034995 42222 194 4.86755 9.443047 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.017   NTclustered gi|1557394408|emb|LR031564.1| 45931 g42066 i0 100 0.144329896907216 28 0 14 0 1 28 23 50 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
2718950 2718950 PRJNA1034995_S_NODE_37283_length_220_cov_1.949153_g37127_i0 PRJNA1034995 37283 220 1.949153 4.2881366 Pratylenchus vulnus 45931 Nematoda Nematoda 54.7 0.005   NTclustered gi|1557394408|emb|LR031564.1| 45931 g37127 i0 100 0.131818181818182 29 0 13 0 192 220 51 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
3995053 3995053 PRJNA1034995_S_NODE_39584_length_207_cov_3.737805_g39428_i0 PRJNA1034995 39584 207 3.737805 7.73725635 Pratylenchus vulnus 45931 Nematoda Nematoda 54.7 0.005   NTclustered gi|1557394408|emb|LR031564.1| 45931 g39428 i0 100 0.140096618357488 29 0 14 0 179 207 51 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
6546549 6546549 PRJNA1034995_S_NODE_35726_length_229_cov_4.204301_g35570_i0 PRJNA1034995 35726 229 4.204301 9.62784929 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.02   NTclustered gi|1557394408|emb|LR031564.1| 45931 g35570 i0 100 0.122270742358079 28 0 12 0 1 28 23 50 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
6546623 6546623 PRJNA1034995_S_NODE_46486_length_176_cov_7.624060_g46330_i0 PRJNA1034995 46486 176 7.62406 13.4183456 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.015   NTclustered gi|1557394408|emb|LR031564.1| 45931 g46330 i0 100 0.159090909090909 28 0 16 0 149 176 50 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
7821047 7821047 PRJNA1034995_S_NODE_24627_length_321_cov_13.446043_g24471_i0 PRJNA1034995 24627 321 13.446043 43.16179803 Pratylenchus vulnus 45931 Nematoda Nematoda 56.5 0.002   NTclustered gi|1557394408|emb|LR031564.1| 45931 g24471 i0 100 0.0934579439252336 30 0 9 0 292 321 54 25 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
9095944 9095944 PRJNA1034995_S_NODE_23768_length_331_cov_13.409722_g23612_i0 PRJNA1034995 23768 331 13.409722 44.38617982 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.031   NTclustered gi|1557394408|emb|LR031564.1| 45931 g23612 i0 100 0.0845921450151057 28 0 8 0 304 331 50 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
9096006 9096006 PRJNA1034995_S_NODE_31108_length_261_cov_9.472477_g30952_i0 PRJNA1034995 31108 261 9.472477 24.72316497 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.024   NTclustered gi|1557394408|emb|LR031564.1| 45931 g30952 i0 100 0.10727969348659 28 0 11 0 234 261 50 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
11647014 11647014 PRJNA1034995_S_NODE_31530_length_258_cov_5.297674_g31374_i0 PRJNA1034995 31530 258 5.297674 13.66799892 Pratylenchus vulnus 45931 Nematoda Nematoda 56.5 0.002   NTclustered gi|1557394408|emb|LR031564.1| 45931 g31374 i0 96.97 0.127906976744186 33 1 13 0 1 33 23 55 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 33 56.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
11647028 11647028 PRJNA1034995_S_NODE_32870_length_248_cov_3.614634_g32714_i0 PRJNA1034995 32870 248 3.614634 8.96429232 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.022   NTclustered gi|1557394408|emb|LR031564.1| 45931 g32714 i0 100 0.112903225806452 28 0 11 0 1 28 23 50 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
11647099 11647099 PRJNA1034995_S_NODE_43750_length_187_cov_7.118056_g43594_i0 PRJNA1034995 43750 187 7.118056 13.31076472 Pratylenchus vulnus 45931 Nematoda Nematoda 56.5 0.001   NTclustered gi|1557394408|emb|LR031564.1| 45931 g43594 i0 100 0.160427807486631 30 0 16 0 158 187 52 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
11647116 11647116 PRJNA1034995_S_NODE_47250_length_173_cov_12.807692_g47094_i0 PRJNA1034995 47250 173 12.807692 22.15730716 Caenorhabditis elegans 6239 Nematoda Nematoda 52.8 0.015   NTclustered gi|351062746|emb|FO081321.1| 6239 g47094 i0 100 0.809248554913295 28 0 16 0 61 88 194 167 Caenorhabditis elegans Cosmid F37F2, complete sequence blastn 140 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
12922263 12922263 PRJNA1034995_S_NODE_43291_length_189_cov_8.178082_g43135_i0 PRJNA1034995 43291 189 8.178082 15.45657498 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.016   NTclustered gi|1557394408|emb|LR031564.1| 45931 g43135 i0 100 0.148148148148148 28 0 15 0 162 189 50 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
12922276 12922276 PRJNA1034995_S_NODE_45791_length_179_cov_3.727941_g45635_i0 PRJNA1034995 45791 179 3.727941 6.67301439 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.015   NTclustered gi|1557394408|emb|LR031564.1| 45931 g45635 i0 100 0.156424581005587 28 0 16 0 1 28 23 50 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
14197121 14197121 PRJNA1034995_S_NODE_35432_length_231_cov_2.308511_g35276_i0 PRJNA1034995 35432 231 2.308511 5.33266041 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.021   NTclustered gi|1557394408|emb|LR031564.1| 45931 g35276 i0 100 0.121212121212121 28 0 12 0 204 231 50 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
15471361 15471361 PRJNA1034995_S_NODE_38273_length_214_cov_4.906433_g38117_i0 PRJNA1034995 38273 214 4.906433 10.49976662 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.019   NTclustered gi|1557394408|emb|LR031564.1| 45931 g38117 i0 100 0.130841121495327 28 0 13 0 187 214 50 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
16745337 16745337 PRJNA1034995_S_NODE_22434_length_348_cov_29.193443_g22278_i0 PRJNA1034995 22434 348 29.193443 101.59318164 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.033   NTclustered gi|1557394408|emb|LR031564.1| 45931 g22278 i0 100 0.0804597701149425 28 0 8 0 1 28 24 51 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
19294327 19294327 PRJNA1034995_S_NODE_42776_length_191_cov_60.000000_g42620_i0 PRJNA1034995 42776 191 60 114.6 Caenorhabditis elegans 6239 Nematoda Nematoda 65.8 2.11e-6   NTclustered gi|152002989|emb|Z67755.2| 6239 g42620 i0 90 3.01570680628272 50 5 26 0 4 53 39897 39848 Caenorhabditis elegans Cosmid F54F7, complete sequence blastn 576 65.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
19294344 19294344 PRJNA1034995_S_NODE_44756_length_183_cov_4.457143_g44600_i0 PRJNA1034995 44756 183 4.457143 8.15657169 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.016   NTclustered gi|1557394408|emb|LR031564.1| 45931 g44600 i0 100 0.153005464480874 28 0 15 0 156 183 50 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
20569661 20569661 PRJNA1034995_S_NODE_36417_length_225_cov_3.670330_g36261_i0 PRJNA1034995 36417 225 3.67033 8.2582425 Pratylenchus vulnus 45931 Nematoda Nematoda 54.7 0.006   NTclustered gi|1557394408|emb|LR031564.1| 45931 g36261 i0 100 0.128888888888889 29 0 13 0 1 29 23 51 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
24394428 24394428 PRJNA1034995_S_NODE_16760_length_447_cov_23.084158_g16606_i0 PRJNA1034995 16760 447 23.084158 103.18618626 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.043   NTclustered gi|1557394408|emb|LR031564.1| 45931 g16606 i0 100 0.0626398210290828 28 0 6 0 1 28 23 50 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
24394610 24394610 PRJNA1034995_S_NODE_42180_length_194_cov_8.238411_g42024_i0 PRJNA1034995 42180 194 8.238411 15.98251734 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.017   NTclustered gi|1557394408|emb|LR031564.1| 45931 g42024 i0 100 0.144329896907216 28 0 14 0 1 28 23 50 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
24394614 24394614 PRJNA1034995_S_NODE_42480_length_193_cov_3.586667_g42324_i0 PRJNA1034995 42480 193 3.586667 6.92226731 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.017   NTclustered gi|1557394408|emb|LR031564.1| 45931 g42324 i0 100 0.145077720207254 28 0 15 0 1 28 23 50 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;