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contig_metadata

9 rows where bioproject = "PRJNA1034995" and tax_clade = "CRuMs"

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tax_superkingdom 1

tax_clade 1

  • CRuMs · 9 ✖

bioproject 1

  • PRJNA1034995 · 9 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3994945 3994945 PRJNA1034995_S_NODE_24904_length_318_cov_14.989091_g24748_i0 PRJNA1034995 24904 318 14.989091 47.66530938 uncultured Collodictyonidae 440571 Root_unresolved Root_unresolved 58.4 6.41e-4   NTclustered gi|2733867141|gb|PP812520.1| 440571 g24748 i0 100 0.471698113207547 31 0 10 0 288 318 104 74 Uncultured Collodictyonidae isolate Col19 small subunit ribosomal RNA gene and internal transcribed spacer region, partial sequence blastn 150 58.4 1 Eukaryota CRuMs         Collodictyonidae   uncultured Collodictyonidae
5271301 5271301 PRJNA1034995_S_NODE_29525_length_273_cov_52.360870_g29369_i0 PRJNA1034995 29525 273 52.36087 142.9451751 uncultured Collodictyonidae 440571 Root_unresolved Root_unresolved 56.5 0.002   NTclustered gi|2733867141|gb|PP812520.1| 440571 g29369 i0 100 0.531135531135531 30 0 11 0 244 273 103 74 Uncultured Collodictyonidae isolate Col19 small subunit ribosomal RNA gene and internal transcribed spacer region, partial sequence blastn 145 56.5 1 Eukaryota CRuMs         Collodictyonidae   uncultured Collodictyonidae
6546499 6546499 PRJNA1034995_S_NODE_30706_length_264_cov_7.289593_g30550_i0 PRJNA1034995 30706 264 7.289593 19.24452552 uncultured Collodictyonidae 440571 Root_unresolved Root_unresolved 56.5 0.002   NTclustered gi|2733867141|gb|PP812520.1| 440571 g30550 i0 100 0.549242424242424 30 0 11 0 235 264 103 74 Uncultured Collodictyonidae isolate Col19 small subunit ribosomal RNA gene and internal transcribed spacer region, partial sequence blastn 145 56.5 1 Eukaryota CRuMs         Collodictyonidae   uncultured Collodictyonidae
15471212 15471212 PRJNA1034995_S_NODE_18133_length_418_cov_22.661333_g17978_i0 PRJNA1034995 18133 418 22.661333 94.72437194 uncultured Collodictyonidae 440571 Root_unresolved Root_unresolved 52.8 0.04   NTclustered gi|2733867141|gb|PP812520.1| 440571 g17978 i0 96.875 0.076555023923445 32 0 8 1 387 418 106 76 Uncultured Collodictyonidae isolate Col19 small subunit ribosomal RNA gene and internal transcribed spacer region, partial sequence blastn 32 52.8 1 Eukaryota CRuMs         Collodictyonidae   uncultured Collodictyonidae
15471379 15471379 PRJNA1034995_S_NODE_40953_length_200_cov_3.834395_g40797_i0 PRJNA1034995 40953 200 3.834395 7.66879 uncultured Collodictyonidae 440571 Root_unresolved Root_unresolved 58.4 3.73e-4   NTclustered gi|2733867141|gb|PP812520.1| 440571 g40797 i0 100 0.73 31 0 16 0 170 200 104 74 Uncultured Collodictyonidae isolate Col19 small subunit ribosomal RNA gene and internal transcribed spacer region, partial sequence blastn 146 58.4 1 Eukaryota CRuMs         Collodictyonidae   uncultured Collodictyonidae
16745414 16745414 PRJNA1034995_S_NODE_30434_length_266_cov_7.497758_g30278_i0 PRJNA1034995 30434 266 7.497758 19.94403628 uncultured Collodictyonidae 440571 Root_unresolved Root_unresolved 56.5 0.002   NTclustered gi|2733867141|gb|PP812520.1| 440571 g30278 i0 100 0.545112781954887 30 0 11 0 1 30 74 103 Uncultured Collodictyonidae isolate Col19 small subunit ribosomal RNA gene and internal transcribed spacer region, partial sequence blastn 145 56.5 1 Eukaryota CRuMs         Collodictyonidae   uncultured Collodictyonidae
21845305 21845305 PRJNA1034995_S_NODE_25458_length_312_cov_14.386617_g25302_i0 PRJNA1034995 25458 312 14.386617 44.88624504 uncultured Collodictyonidae 440571 Root_unresolved Root_unresolved 58.4 6.27e-4   NTclustered gi|2733867141|gb|PP812520.1| 440571 g25302 i0 100 0.480769230769231 31 0 10 0 282 312 104 74 Uncultured Collodictyonidae isolate Col19 small subunit ribosomal RNA gene and internal transcribed spacer region, partial sequence blastn 150 58.4 1 Eukaryota CRuMs         Collodictyonidae   uncultured Collodictyonidae
23120650 23120650 PRJNA1034995_S_NODE_27079_length_296_cov_11.727273_g26923_i0 PRJNA1034995 27079 296 11.727273 34.71272808 uncultured Collodictyonidae 440571 Root_unresolved Root_unresolved 54.7 0.008   NTclustered gi|2733867141|gb|PP812520.1| 440571 g26923 i0 100 0.476351351351351 29 0 10 0 268 296 103 75 Uncultured Collodictyonidae isolate Col19 small subunit ribosomal RNA gene and internal transcribed spacer region, partial sequence blastn 141 54.7 1 Eukaryota CRuMs         Collodictyonidae   uncultured Collodictyonidae
24394532 24394532 PRJNA1034995_S_NODE_30080_length_269_cov_3.707965_g29924_i0 PRJNA1034995 30080 269 3.707965 9.97442585 uncultured Collodictyonidae 440571 Root_unresolved Root_unresolved 58.4 5.3e-4   NTclustered gi|2733867141|gb|PP812520.1| 440571 g29924 i0 97.143 0.557620817843866 35 0 13 1 235 269 107 74 Uncultured Collodictyonidae isolate Col19 small subunit ribosomal RNA gene and internal transcribed spacer region, partial sequence blastn 150 58.4 1 Eukaryota CRuMs         Collodictyonidae   uncultured Collodictyonidae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;