RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1034994" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1034994 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9935694 9935694 PRJNA1034994_P_NODE_7868_length_247_cov_2.655172_g7784_i0 PRJNA1034994 7868 247 2.655172 6.55827484 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 379 9.02e-101   NTclustered gi|937513727|gb|CP012850.1| 1353260 g7784 i0 94.332 33.9878542510121 247 14 100 0 1 247 848821 848575 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 8395 379 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
22684432 22684432 PRJNA1034994_P_NODE_6798_length_251_cov_0.865169_g6714_i0 PRJNA1034994 6798 251 0.865169 2.17157419 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 425 1.16e-114   NTclustered gi|937513727|gb|CP012850.1| 1353260 g6714 i0 97.211 103.430278884462 251 7 100 0 1 251 849817 849567 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 25961 425 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;