RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1034994" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1034994 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18020137 18020137 PRJNA1034994_P_NODE_9015_length_244_cov_0.900585_g8931_i0 PRJNA1034994 9015 244 0.900585 2.1974274 Gamsiella multidivaricata 101098 Fungi Fungi 187 5.7799999999999984e-43   NTclustered gi|2323775565|ref|XM_051554930.1| 101098 g8931 i0 85.876 13.7909836065574 177 23 72 2 65 240 217 392 Gamsiella multidivaricata ATP synthase subunit alpha (BC939DRAFT_446273), mRNA blastn 3365 187 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
20133946 20133946 PRJNA1034994_P_NODE_2916_length_302_cov_1.995633_g2832_i0 PRJNA1034994 2916 302 1.995633 6.02681166 Rhizophagus 295919 Fungi Fungi 553 6.32e-153   NTclustered gi|410810124|emb|HE858374.1| 231055 g2832 i0 99.669 100.013245033113 302 1 100 0 1 302 316 15 Uncultured Glomus partial 28S rRNA gene, clone WW1-1 blastn 30204 553 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae   uncultured Glomus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;