contig_metadata
17 rows where bioproject = "PRJNA1034994" and tax_kingdom = "Thermotogati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2282780 | 2282780 | PRJNA1034994_P_NODE_542_length_722_cov_3.020031_g461_i0 | PRJNA1034994 | 542 | 722 | 3.020031 | 21.80462382 | Deinococcus | 1298 | Bacteria | Bacteria | 1016 | 0 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g461 | i0 | 92.265 | 193.076177285319 | 724 | 44 | 100 | 9 | 1 | 722 | 2341168 | 2341881 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 139401 | 1016 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 3558168 | 3558168 | PRJNA1034994_P_NODE_403_length_844_cov_4.625162_g330_i0 | PRJNA1034994 | 403 | 844 | 4.625162 | 39.03636728 | Deinococcus | 1298 | Bacteria | Bacteria | 1535 | 0 | NTclustered | gi|1142915234|gb|KX832182.1| | 47478 | g330 | i0 | 99.761 | 138.986966824645 | 838 | 0 | 99 | 1 | 7 | 844 | 1 | 836 | Deinococcus sp. strain 311:FR1_AP2_32 16S ribosomal RNA gene, partial sequence | blastn | 117305 | 1541 | 0.99610642439974 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 3994776 | 3994776 | PRJNA1034994_P_NODE_3764_length_284_cov_1.146919_g3680_i0 | PRJNA1034994 | 3764 | 284 | 1.146919 | 3.2572499600000002 | Thermus sp. NEB1569 | 2918899 | Bacteria | Bacteria | 520 | 5.98e-143 | NTclustered | gi|2199052145|gb|CP092445.1| | 2918899 | g3680 | i0 | 99.648 | 1 | 284 | 1 | 100 | 0 | 1 | 284 | 1065881 | 1065598 | Thermus sp. NEB1569 chromosome, complete genome | blastn | 284 | 520 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus sp. NEB1569 | ||
| 3994804 | 3994804 | PRJNA1034994_P_NODE_7384_length_249_cov_0.875000_g7300_i0 | PRJNA1034994 | 7384 | 249 | 0.875 | 2.17875 | Deinococcus sp. AB2017081 | 3093660 | Bacteria | Bacteria | 342 | 1.1899999999999999e-89 | NTclustered | gi|2636768990|gb|CP140098.1| | 3093660 | g7300 | i0 | 91.837 | 27.8152610441767 | 245 | 20 | 98 | 0 | 5 | 249 | 1289501 | 1289257 | Deinococcus sp. AB2017081 chromosome, complete genome | blastn | 6926 | 342 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. AB2017081 | ||
| 6546319 | 6546319 | PRJNA1034994_P_NODE_9026_length_244_cov_0.900585_g8942_i0 | PRJNA1034994 | 9026 | 244 | 0.900585 | 2.1974274 | Deinococcus ficus | 317577 | Bacteria | Bacteria | 233 | 7.319999999999999e-57 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g8942 | i0 | 85.526 | 4.99180327868852 | 228 | 27 | 92 | 6 | 14 | 238 | 1437296 | 1437520 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 1218 | 233 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 7820896 | 7820896 | PRJNA1034994_P_NODE_5627_length_261_cov_2.377660_g5543_i0 | PRJNA1034994 | 5627 | 261 | 2.37766 | 6.2056926 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 244 | 3.66e-60 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g5543 | i0 | 83.588 | 21.1072796934866 | 262 | 41 | 100 | 2 | 1 | 261 | 69686 | 69946 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 5509 | 244 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 8660711 | 8660711 | PRJNA1034994_P_NODE_467_length_788_cov_2.268531_g392_i0 | PRJNA1034994 | 467 | 788 | 2.268531 | 17.87602428 | Deinococcus | 1298 | Bacteria | Bacteria | 1190 | 0 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g392 | i0 | 93.836 | 212.215736040609 | 795 | 41 | 100 | 6 | 1 | 788 | 423331 | 424124 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 167226 | 1190 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 10371521 | 10371521 | PRJNA1034994_P_NODE_8929_length_244_cov_2.461988_g8845_i0 | PRJNA1034994 | 8929 | 244 | 2.461988 | 6.00725072 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 346 | 9.019999999999999e-91 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g8845 | i0 | 92.531 | 202.073770491803 | 241 | 18 | 99 | 0 | 4 | 244 | 544326 | 544086 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 49306 | 346 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 14196850 | 14196850 | PRJNA1034994_P_NODE_1612_length_399_cov_2.450920_g1528_i0 | PRJNA1034994 | 1612 | 399 | 2.45092 | 9.7791708 | Deinococcus apachensis | 309886 | Bacteria | Bacteria | 549 | 1.1099999999999999e-151 | NTclustered | gi|413911378|gb|KC113139.1| | 309886 | g1528 | i0 | 92.072 | 111.050125313283 | 391 | 30 | 98 | 1 | 8 | 398 | 390 | 1 | Deinococcus apachensis strain KSI 1117 16S ribosomal RNA gene, partial sequence | blastn | 44309 | 549 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus apachensis | ||
| 15035235 | 15035235 | PRJNA1034994_P_NODE_4832_length_270_cov_2.969543_g4748_i0 | PRJNA1034994 | 4832 | 270 | 2.969543 | 8.0177661 | Truepera | 332248 | Bacteria | Bacteria | 355 | 1.6799999999999996e-93 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g4748 | i0 | 90.406 | 113.659259259259 | 271 | 25 | 100 | 1 | 1 | 270 | 1823 | 1553 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 30688 | 355 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 16745215 | 16745215 | PRJNA1034994_P_NODE_8754_length_245_cov_0.895349_g8670_i0 | PRJNA1034994 | 8754 | 245 | 0.895349 | 2.19360505 | Deinococcus yunweiensis | 367282 | Bacteria | Bacteria | 246 | 9.449999999999999e-61 | NTclustered | gi|2890653062|gb|CP177252.1| | 367282 | g8670 | i0 | 84.836 | 10.5551020408163 | 244 | 37 | 99 | 0 | 2 | 245 | 3423832 | 3424075 | Deinococcus yunweiensis strain KCTC 3955 chromosome, complete genome | blastn | 2586 | 246 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus yunweiensis | ||
| 18859231 | 18859231 | PRJNA1034994_P_NODE_6015_length_257_cov_1.673913_g5931_i0 | PRJNA1034994 | 6015 | 257 | 1.673913 | 4.30195641 | Truepera | 332248 | Bacteria | Bacteria | 272 | 1.65e-68 | NTclustered | gi|2573973991|gb|CP133611.1| | 332249 | g5931 | i0 | 86.345 | 16.3813229571984 | 249 | 34 | 97 | 0 | 1 | 249 | 3169282 | 3169530 | Truepera radiovictrix strain CIP 108686 chromosome, complete genome | blastn | 4210 | 272 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 19294060 | 19294060 | PRJNA1034994_P_NODE_5816_length_260_cov_0.919786_g5732_i0 | PRJNA1034994 | 5816 | 260 | 0.919786 | 2.3914436 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 339 | 1.62e-88 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g5732 | i0 | 90.494 | 316.65 | 263 | 15 | 99 | 9 | 3 | 260 | 68900 | 68643 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 82329 | 339 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 20133988 | 20133988 | PRJNA1034994_P_NODE_816_length_577_cov_2.825397_g733_i0 | PRJNA1034994 | 816 | 577 | 2.825397 | 16.30254069 | Deinococcus | 1298 | Bacteria | Bacteria | 815 | 0 | NTclustered | gi|470478007|ref|NR_076423.1| | 68909 | g733 | i0 | 92.15 | 351.027729636049 | 586 | 32 | 100 | 12 | 1 | 577 | 594 | 14 | Deinococcus geothermalis plasmid pDGEO01 strain AG-3a 23S ribosomal RNA gene, complete sequence | blastn | 202543 | 821 | 0.992691839220463 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 20569403 | 20569403 | PRJNA1034994_P_NODE_4477_length_275_cov_1.138614_g4393_i0 | PRJNA1034994 | 4477 | 275 | 1.138614 | 3.1311885 | Deinococcus aquaticus | 328692 | Bacteria | Bacteria | 398 | 2.8199999999999996e-106 | NTclustered | gi|2444120906|gb|CP115165.1| | 328692 | g4393 | i0 | 92.727 | 4 | 275 | 20 | 100 | 0 | 1 | 275 | 961953 | 962227 | Deinococcus aquaticus strain PB-314 chromosome, complete genome | blastn | 1100 | 398 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aquaticus | ||
| 21845155 | 21845155 | PRJNA1034994_P_NODE_7398_length_249_cov_0.875000_g7314_i0 | PRJNA1034994 | 7398 | 249 | 0.875 | 2.17875 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 215 | 2.72e-51 | NTclustered | gi|1339790005|gb|CP026518.1| | 2080419 | g7314 | i0 | 83.7 | 13.0160642570281 | 227 | 37 | 91 | 0 | 1 | 227 | 200186 | 200412 | Deinococcus sp. NW-56 plasmid unnamed2, complete sequence | blastn | 3241 | 215 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 29908941 | 29908941 | PRJNA1034994_P_NODE_5251_length_266_cov_1.186528_g5167_i0 | PRJNA1034994 | 5251 | 266 | 1.186528 | 3.15616448 | Truepera radiovictrix | 332249 | Bacteria | Bacteria | 44.3 | 0.0132 | NR | WP_013178081.1 | 332249 | g5167 | i0 | 94.7 | 0.214285714285714 | 19 | 1 | 21.4 | 0 | 4 | 60 | 312 | 330 | WP_013178081.1 YsnF/AvaK domain-containing protein [Truepera radiovictrix] | diamond | 57 | 44.3 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;