RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1034994" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA1034994 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2282797 2282797 PRJNA1034994_P_NODE_762_length_598_cov_0.973333_g679_i0 PRJNA1034994 762 598 0.973333 5.82053134 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 1064 0   NTclustered gi|1842055115|gb|CP040000.1| 713059 g679 i0 98.829 210.183946488294 598 6 100 1 1 598 146823 146227 Candidatus Saccharibacteria bacterium oral taxon 488 strain FS03P chromosome, complete genome blastn 125690 1072 0.992537313432836 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
20569402 20569402 PRJNA1034994_P_NODE_4377_length_276_cov_1.517241_g4293_i0 PRJNA1034994 4377 276 1.517241 4.18758516 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 114 3.8e-29   NR MEO7904236.1 2973664 g4293 i0 84.6 2.20652173913043 65 10 70.7 0 81 275 1 65 MEO7904236.1 ParA family protein [Candidatus Saccharimonadales bacterium] diamond 609 114 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
27216563 27216563 PRJNA1034994_P_NODE_10102_length_241_cov_0.916667_g10018_i0 PRJNA1034994 10102 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 136 1.82e-37   NR MBP9738539.1 2026720 g10018 i0 97.4 30.1120331950207 78 2 97.1 0 1 234 88 165 MBP9738539.1 glyceraldehyde-3-phosphate dehydrogenase [Candidatus Saccharibacteria bacterium] diamond 7257 136 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29869248 29869248 PRJNA1034994_P_NODE_2751_length_310_cov_2.890295_g2667_i0 PRJNA1034994 2751 310 2.890295 8.9599145 Bacteria 2 Bacteria Bacteria 90.9 7e-19   NR MDZ7726070.1 2026716 g2667 i0 61 3.65806451612903 59 23 57.1 0 131 307 202 260 MDZ7726070.1 ATP-grasp domain-containing protein [Candidatus Campbellbacteria bacterium] diamond 1134 90.9 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;