contig_metadata
10 rows where bioproject = "PRJNA1032461", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7819700 | 7819700 | PRJNA1032461_S_NODE_15467_length_168_cov_0.873950_g15369_i0 | PRJNA1032461 | 15467 | 168 | 0.87395 | 1.468236 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 99 | 1.79e-16 | NTclustered | gi|1338588479|gb|CP012673.1| | 56 | g15369 | i0 | 88.095 | 27.1547619047619 | 84 | 8 | 49 | 2 | 1 | 83 | 842366 | 842284 | Sorangium cellulosum strain So ce26 chromosome, complete genome | blastn | 4562 | 99 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 10370266 | 10370266 | PRJNA1032461_S_NODE_129_length_1113_cov_10.936090_g80_i0 | PRJNA1032461 | 129 | 1113 | 10.93609 | 121.7186817 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 1628 | 0 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g80 | i0 | 93.042 | 166.339622641509 | 1121 | 67 | 100 | 9 | 1 | 1113 | 3941786 | 3942903 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 185136 | 1628 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 10370269 | 10370269 | PRJNA1032461_S_NODE_13329_length_172_cov_2.536585_g13231_i0 | PRJNA1032461 | 13329 | 172 | 2.536585 | 4.3629262 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 279 | 6.08e-71 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g13231 | i0 | 95.93 | 266.354651162791 | 172 | 7 | 100 | 0 | 1 | 172 | 3942261 | 3942090 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 45813 | 279 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 23959624 | 23959624 | PRJNA1032461_S_NODE_6759_length_228_cov_1.972067_g6661_i0 | PRJNA1032461 | 6759 | 228 | 1.972067 | 4.49631276 | Myxococcia | 32015 | Bacteria | Bacteria | 279 | 8.56e-71 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g6661 | i0 | 88.696 | 142.34649122807 | 230 | 24 | 100 | 1 | 1 | 228 | 3943120 | 3943349 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 32455 | 279 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 29805922 | 29805922 | PRJNA1032461_S_NODE_18111_length_165_cov_0.896552_g18013_i0 | PRJNA1032461 | 18111 | 165 | 0.896552 | 1.4793108 | Myxococcia | 32015 | Bacteria | Bacteria | 65.9 | 8.63e-11 | NR | MDB4945668.1 | 1971228 | g18013 | i0 | 64.8 | 2.94545454545455 | 54 | 19 | 98.2 | 0 | 2 | 163 | 272 | 325 | MDB4945668.1 hypothetical protein [Labilithrix sp.] | diamond | 486 | 65.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix sp. | |||
| 29900933 | 29900933 | PRJNA1032461_S_NODE_15051_length_168_cov_1.184874_g14953_i0 | PRJNA1032461 | 15051 | 168 | 1.184874 | 1.99058832 | Myxococcia | 32015 | Bacteria | Bacteria | 77 | 1.05e-14 | NR | MBX3191304.1 | 1971228 | g14953 | i0 | 64.8 | 2.92857142857143 | 54 | 19 | 96.4 | 0 | 2 | 163 | 102 | 155 | MBX3191304.1 nickel pincer cofactor biosynthesis protein LarC [Labilithrix sp.] | diamond | 492 | 77 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix sp. | |||
| 30193015 | 30193015 | PRJNA1032461_S_NODE_19192_length_164_cov_0.904348_g19094_i0 | PRJNA1032461 | 19192 | 164 | 0.904348 | 1.48313072 | Labilithrix sp. | 1971228 | Bacteria | Bacteria | 89 | 6.5e-19 | NR | MBX3204713.1 | 1971228 | g19094 | i0 | 68.5 | 1.97560975609756 | 54 | 17 | 98.8 | 0 | 164 | 3 | 111 | 164 | MBX3204713.1 DnaJ domain-containing protein [Labilithrix sp.] | diamond | 324 | 89 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix sp. | |||
| 30983170 | 30983170 | PRJNA1032461_S_NODE_17714_length_166_cov_0.888889_g17616_i0 | PRJNA1032461 | 17714 | 166 | 0.888889 | 1.47555574 | Polyangia bacterium | 3058050 | Bacteria | Bacteria | 79 | 2.05e-15 | NR | MEO6954370.1 | 3058050 | g17616 | i0 | 76.1 | 0.831325301204819 | 46 | 11 | 83.1 | 0 | 3 | 140 | 411 | 456 | MEO6954370.1 outer membrane protein transport protein [Polyangia bacterium] | diamond | 138 | 79 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangia bacterium | ||||||
| 31109234 | 31109234 | PRJNA1032461_S_NODE_19695_length_164_cov_0.904348_g19597_i0 | PRJNA1032461 | 19695 | 164 | 0.904348 | 1.48313072 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 41.6 | 0.0334 | NR | MEM6925389.1 | 2818507 | g19597 | i0 | 42.3 | 0.951219512195122 | 52 | 25 | 86 | 1 | 17 | 157 | 436 | 487 | MEM6925389.1 putative metal-binding motif-containing protein [Myxococcota bacterium] | diamond | 156 | 41.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 32343279 | 32343279 | PRJNA1032461_S_NODE_21079_length_162_cov_1.150442_g20981_i0 | PRJNA1032461 | 21079 | 162 | 1.150442 | 1.86371604 | Labilithrix sp. | 1971228 | Bacteria | Bacteria | 101 | 2.4099999999999994e-23 | NR | MDB4940636.1 | 1971228 | g20981 | i0 | 98.1 | 1 | 54 | 1 | 100 | 0 | 162 | 1 | 57 | 110 | MDB4940636.1 polymerase sigma-54 factor RpoN [Labilithrix sp.] | diamond | 162 | 101 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;