RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1032461" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1032461 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1441786 1441786 PRJNA1032461_S_NODE_16962_length_166_cov_1.307692_g16864_i0 PRJNA1032461 16962 166 1.307692 2.17076872 Metazoa 33208 Mollusca Mollusca 103 6.95e-26   NR XP_046373631.1 6454 g16864 i0 83.6 15.9036144578313 55 9 99.4 0 2 166 54 108 XP_046373631.1 receptor expression-enhancing protein 5-like isoform X2 [Haliotis rufescens] diamond 2640 103 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
10370271 10370271 PRJNA1032461_S_NODE_13409_length_172_cov_1.268293_g13311_i0 PRJNA1032461 13409 172 1.268293 2.18146396 Lottia gigantea 225164 Mollusca Mollusca 110 8.44e-20   NTclustered gi|676428874|ref|XM_009047169.1| 225164 g13311 i0 78.235 2.76744186046512 170 37 99 0 3 172 225 56 Lottia gigantea hypothetical protein mRNA blastn 476 110 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
31868264 31868264 PRJNA1032461_S_NODE_5997_length_238_cov_2.539683_g5899_i0 PRJNA1032461 5997 238 2.539683 6.04444554 Haliotis asinina 109174 Mollusca Mollusca 43.9 0.0128   NR XP_067657806.1 109174 g5899 i0 35.4 1.61344537815126 65 36 80.7 2 236 45 144 203 XP_067657806.1 uncharacterized protein [Haliotis asinina] diamond 384 43.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;