RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1032461", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1032461 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30730207 30730207 PRJNA1032461_S_NODE_9094_length_203_cov_1.012987_g8996_i0 PRJNA1032461 9094 203 1.012987 2.05636361 Mermis nigrescens 70421 Nematoda Nematoda 67.8 2.28e-12   NR AAF36102.1 70421 g8996 i0 53.7 2.05418719211823 67 29 96.1 1 2 196 58 124 AAF36102.1 ribosomal protein L6, partial [Mermis nigrescens] diamond 417 67.8 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Mermithida Mermithidae Mermis Mermis nigrescens
31575864 31575864 PRJNA1032461_S_NODE_4476_length_271_cov_1.400901_g4378_i0 PRJNA1032461 4476 271 1.400901 3.79644171 Rhabditida 6236 Nematoda Nematoda 130 9.18e-37   NR KAH7727725.1 70226 g4378 i0 83.3 5.88929889298893 72 12 79.7 0 270 55 30 101 KAH7727725.1 30S ribosomal protein S26e [Aphelenchoides avenae] diamond 1596 131 0.99236641221374 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;