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contig_metadata

7 rows where bioproject = "PRJNA1032461", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 7 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 7 ✖

bioproject 1

  • PRJNA1032461 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16309507 16309507 PRJNA1032461_S_NODE_13493_length_171_cov_6.434426_g13395_i0 PRJNA1032461 13493 171 6.434426 11.00286846 root 1 Root_unresolved Root_unresolved 316 4.6e-82   NTclustered gi|1866582754|gb|MT730929.1| 64517 g13395 i0 100 99.9298245614035 171 0 100 0 1 171 1424 1594 Rhizophlyctis rosea isolate KP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17088 316 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
18859006 18859006 PRJNA1032461_S_NODE_8795_length_205_cov_2.102564_g8697_i0 PRJNA1032461 8795 205 2.102564 4.3102562 Rhizophlyctis 64515 Fungi Fungi 374 3.3599999999999997e-99   NTclustered gi|1866582754|gb|MT730929.1| 64517 g8697 i0 99.512 100.00487804878 205 1 100 0 1 205 3318 3114 Rhizophlyctis rosea isolate KP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20501 374 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
19292926 19292926 PRJNA1032461_S_NODE_2996_length_322_cov_4.890110_g2898_i0 PRJNA1032461 2996 322 4.89011 15.7461542 Spizellomyces punctatus 109760 Fungi Fungi 265 3.57e-66   NTclustered gi|1027029543|ref|XR_001677161.1| 645134 g2898 i0 93.785 46.3074534161491 177 10 55 1 147 322 4083 3907 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11002), rRNA blastn 14911 265 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
21843905 21843905 PRJNA1032461_S_NODE_12638_length_176_cov_3.275591_g12540_i0 PRJNA1032461 12638 176 3.275591 5.76504016 Rhizophlyctis rosea 64517 Fungi Fungi 320 3.69e-83   NTclustered gi|1866582754|gb|MT730929.1| 64517 g12540 i0 99.432 100.465909090909 176 1 100 0 1 176 3781 3956 Rhizophlyctis rosea isolate KP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17682 320 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
22683987 22683987 PRJNA1032461_S_NODE_1718_length_403_cov_7.644068_g1620_i0 PRJNA1032461 1718 403 7.644068 30.80559404 Rhizophlyctis 64515 Fungi Fungi 689 0   NTclustered gi|1866582759|gb|MT730934.1| 64517 g1620 i0 97.519 97.6873449131514 403 10 100 0 1 403 2782 3184 Rhizophlyctis rosea isolate KP37 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 39368 695 0.99136690647482 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
22684131 22684131 PRJNA1032461_S_NODE_6138_length_236_cov_2.395722_g6040_i0 PRJNA1032461 6138 236 2.395722 5.65390392 Chytridiomycetes 451435 Fungi Fungi 429 8.369999999999998e-116   NTclustered gi|1866582754|gb|MT730929.1| 64517 g6040 i0 99.574 99.5762711864407 235 1 99 0 1 235 124 358 Rhizophlyctis rosea isolate KP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23500 429 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
24393146 24393146 PRJNA1032461_S_NODE_1960_length_382_cov_6.315315_g1862_i0 PRJNA1032461 1960 382 6.315315 24.1245033 Rhizophlyctis rosea 64517 Fungi Fungi 689 0   NTclustered gi|1866582759|gb|MT730934.1| 64517 g1862 i0 99.215 100.086387434555 382 3 100 0 1 382 4384 4003 Rhizophlyctis rosea isolate KP37 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 38233 689 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;