RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1032461" and tax_clade = "Discoba"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA1032461 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28108864 28108864 PRJNA1032461_S_NODE_14805_length_169_cov_0.866667_g14707_i0 PRJNA1032461 14805 169 0.866667 1.46466723 Bodo saltans 75058 Euglenozoa other_Eukaryota 107 1.79e-26   NR CUG06164.1 75058 g14707 i0 90.9 0.976331360946746 55 5 97.6 0 167 3 54 108 CUG06164.1 protein kinase, putative [Bodo saltans] diamond 165 107 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
28858732 28858732 PRJNA1032461_S_NODE_14408_length_169_cov_0.866667_g14310_i0 PRJNA1032461 14408 169 0.866667 1.46466723 Naegleria 5761 Heterolobosea other_Eukaryota 106 3.6e-27   NR XP_002669678.1 5762 g14310 i0 85.7 1.98816568047337 56 8 99.4 0 1 168 45 100 XP_002669678.1 uncharacterized protein NAEGRDRAFT_75292 [Naegleria gruberi] diamond 336 106 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;