RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1031674" and tax_phylum = "Zoopagomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1031674 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21843726 21843726 PRJNA1031674_P_NODE_3898_length_410_cov_2.913947_g3688_i0 PRJNA1031674 3898 410 2.913947 11.9471827 Dipsacomyces acuminosporus 4866 Fungi Fungi 130 1.77e-25   NTclustered gi|666440442|gb|KF848901.1| 4866 g3688 i0 76.087 1.64634146341463 276 51 65 14 1 267 1336 1605 Dipsacomyces acuminosporus strain NRRL-2925 28S ribosomal RNA gene, partial sequence blastn 675 130 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Dipsacomyces Dipsacomyces acuminosporus
23119061 23119061 PRJNA1031674_P_NODE_2959_length_456_cov_3.420366_g2749_i0 PRJNA1031674 2959 456 3.420366 15.59686896 Entomophthora muscae 34485 Fungi Fungi 368 3.87e-97   NTclustered gi|82398173|gb|DQ273772.1| 34485 g2749 i0 85.836 31.9122807017544 353 42 77 8 12 361 1707 2054 Entomophthora muscae isolate AFTOL-ID 28 28S ribosomal RNA gene, partial sequence blastn 14552 368 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;