RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1031674", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1031674 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3993047 3993047 PRJNA1031674_P_NODE_1004_length_720_cov_1.183926_g809_i0 PRJNA1031674 1004 720 1.183926 8.5242672 Skokie dicistro-like virus 2789443 Viruses Viruses 1280 0   NTclustered gi|2806502719|gb|PQ054859.1| 2789443 g809 i0 98.75 2.78055555555556 720 9 100 0 1 720 3358 4077 MAG: Skokie dicistro-like virus isolate QJ5MS4721 genomic sequence blastn 2002 1280 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
9094118 9094118 PRJNA1031674_P_NODE_12448_length_285_cov_1.702830_g12237_i0 PRJNA1031674 12448 285 1.70283 4.8530655 Skokie dicistro-like virus 2789443 Viruses Viruses 518 2.16e-142   NTclustered gi|2806502719|gb|PQ054859.1| 2789443 g12237 i0 99.647 1.9859649122807 283 1 99 0 3 285 4385 4103 MAG: Skokie dicistro-like virus isolate QJ5MS4721 genomic sequence blastn 566 518 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
10369951 10369951 PRJNA1031674_P_NODE_22249_length_251_cov_0.865169_g22038_i0 PRJNA1031674 22249 251 0.865169 2.17157419 Sobemovirus RGMOV 3432504 Viruses Viruses 448 2.48e-121   NTclustered gi|2129881132|gb|OK424596.1| 119910 g22038 i0 98.805 10.804780876494 251 3 100 0 1 251 3550 3300 Ryegrass mottle virus isolate RMV/Seattle/USA/2021, complete genome blastn 2712 448 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus RGMOV
12920266 12920266 PRJNA1031674_P_NODE_10151_length_295_cov_2.450450_g9940_i0 PRJNA1031674 10151 295 2.45045 7.2288275 Skokie dicistro-like virus 2789443 Viruses Viruses 518 2.25e-142   NTclustered gi|2806502719|gb|PQ054859.1| 2789443 g9940 i0 98.305 7.18983050847458 295 5 100 0 1 295 1660 1954 MAG: Skokie dicistro-like virus isolate QJ5MS4721 genomic sequence blastn 2121 518 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;