RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1031674", tax_phylum = "Mycoplasmatota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1031674 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15469390 15469390 PRJNA1031674_P_NODE_12653_length_284_cov_3.146919_g12442_i0 PRJNA1031674 12653 284 3.146919 8.93724996 Mycoplasmoides fastidiosum 92758 Bacteria Bacteria 364 2.969999999999999e-96   NTclustered gi|2279714125|gb|CP101809.1| 92758 g12442 i0 90.614 104.901408450704 277 22 96 3 1 274 695833 695558 Mycoplasmoides fastidiosum strain 4822 chromosome, complete genome blastn 29792 364 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Mycoplasmoidaceae Mycoplasmoides Mycoplasmoides fastidiosum
15469452 15469452 PRJNA1031674_P_NODE_16513_length_272_cov_1.517588_g16302_i0 PRJNA1031674 16513 272 1.517588 4.12783936 Candidatus Hepatoplasma crinochetorum 295596 Bacteria Bacteria 503 5.729999999999998e-138   NTclustered gi|588284669|gb|CP006932.1| 1427984 g16302 i0 100 5.125 272 0 100 0 1 272 557185 556914 Candidatus Hepatoplasma crinochetorum Av, complete genome blastn 1394 503 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Candidatus Hepatoplasmataceae Candidatus Hepatoplasma Candidatus Hepatoplasma crinochetorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;