RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1031674", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1031674 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19292463 19292463 PRJNA1031674_P_NODE_18136_length_266_cov_1.528497_g17925_i0 PRJNA1031674 18136 266 1.528497 4.06580202 Amphioctopus fangsiao 515817 Mollusca Mollusca 100 8.57e-17   NTclustered gi|1020270229|gb|KU360565.1| 515817 g17925 i0 93.939 3.94736842105263 66 4 44 0 1 66 139 74 Amphioctopus fangsiao clone DS116 microsatellite sequence blastn 1050 100 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Amphioctopus Amphioctopus fangsiao
23119009 23119009 PRJNA1031674_P_NODE_25659_length_245_cov_0.895349_g25448_i0 PRJNA1031674 25659 245 0.895349 2.19360505 Deroceras reticulatum 145610 Mollusca Mollusca 442 1.1199999999999994e-119   NTclustered gi|1273386133|gb|KX959514.1| 145610 g25448 i0 99.184 100.05306122449 245 2 100 0 1 245 724 480 Deroceras reticulatum 28S ribosomal RNA gene, partial sequence blastn 24513 442 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Agriolimacidae Deroceras Deroceras reticulatum
30320043 30320043 PRJNA1031674_P_NODE_24232_length_247_cov_1.758621_g24021_i0 PRJNA1031674 24232 247 1.758621 4.34379387 Dreissena polymorpha 45954 Mollusca Mollusca 42.7 0.0406   NR XP_052225375.1 45954 g24021 i0 45.7 0.425101214574899 35 19 42.5 0 234 130 574 608 XP_052225375.1 disintegrin and metalloproteinase domain-containing protein 12-like isoform X1 [Dreissena polymorpha] diamond 105 42.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;